Pairwise Alignments

Query, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 507 a.a., group II intron reverse transcriptase/maturase from Escherichia coli ECOR38

 Score =  163 bits (413), Expect = 1e-44
 Identities = 114/386 (29%), Positives = 191/386 (49%), Gaps = 59/386 (15%)

Query: 47  TEERALTKELMGKIVSPSNLVAALRQVVSNKGS--AGIDGMSVEELRQWFSSHYHEFQSQ 104
           T+     + L+  I  P  L  A R  +S+KG+   G+DG++   L+   +      + +
Sbjct: 16  TDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDE 75

Query: 105 IITGKYRVESVREVQIPKPNGGVRILGIPTVKDRLVQQAISQVLSLHYDPTFSDRSYGFR 164
           +++G Y+    R V IPK NG +R LGIP ++DR+VQ+A+   +   ++  F   SYGFR
Sbjct: 76  LLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFR 135

Query: 165 PDRGAHDALRQAGQEVSE-----GRDWIVDIDLEKFFDTVNHDRLMWLLGTRIGDKTLLK 219
           P+R  H A+R    ++++     GR W+++ DL  +FDTV+H  LM  +  RI D   + 
Sbjct: 136 PERSVHHAIRTVKLQLTDCGETRGR-WVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMT 194

Query: 220 LIGKFLRAGMLKDGLVSQGVKGMPQGSPLSPLLSNIILDELDKELEVR------------ 267
           L+ K ++AG +  GL     +G+PQG  +SPLLSNI+L+E D+ L  R            
Sbjct: 195 LLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWY 254

Query: 268 ---------------------GHRFVRYADDLIVMVK-SEPSAKRVLSSLTAFIEQRMLL 305
                                   + RYADD +++VK ++  A+ +       +E  + L
Sbjct: 255 WNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQAEAIREECRGVLEGSLKL 314

Query: 306 KVNKSKSKISRPYE-LNFLGHSILIEGRLGLSKTSEQRLKAKLKQLTQRNRGISLEQLV- 363
           ++N  K+KI+   +   FLGH I+ +     S+  E R+ + + Q   RN   SL  L+ 
Sbjct: 315 RLNMDKTKITHVNDGFIFLGHRIIRK----RSRYGEMRVVSTIPQEKARNFAASLTALLS 370

Query: 364 -----------KELNPILRGWLNYFK 378
                      ++LN  L+GW  +++
Sbjct: 371 GNYSESKVDMAEQLNRKLKGWAMFYQ 396