Pairwise Alignments

Query, 544 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 471 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  101 bits (251), Expect = 7e-26
 Identities = 87/279 (31%), Positives = 125/279 (44%), Gaps = 34/279 (12%)

Query: 11  GLAVLTLSACN-IDRSPYDSITSDDLANSETSAQSVTLGNYSRMKGWSDNWHRLFEYPSD 69
           G  V +  +C+ I++ P +S++ D + +S    +   +G Y   +  S    R   Y   
Sbjct: 16  GTMVFSTVSCDVIEKEPIESLSPDAVFSSPERIEKAVIGIYDDNQNPSFLGGRALVYAD- 74

Query: 70  NVALSGTTTDPLFFTYN---YQRIPNGSRVAGFWRSSYQIIVGTNKVIEAVEEGKSDADD 126
              + G  TDP  +      +  + N   V   W   Y+ I   N  ++A+EE +S    
Sbjct: 75  ---IRGGDTDPASYFGGVGLFNTLSNDGTVMAAWTGGYRAIYTANLFLQALEENRSKVAT 131

Query: 127 QLLAENY-----YIRALMHYQLINIFGRPY--VQGRENEGVPLKLDG-------DPESIP 172
             LA  Y     ++RAL H+ LIN+F +PY       + G+P+ L          PE+  
Sbjct: 132 VALANQYEAEAKFVRALNHWYLINLFAQPYNFTSDASHLGIPVALKAFDASSAFAPEAQL 191

Query: 173 VRSTVGEVYDQVESDLLRAASLFTAEK----SNVY-ATQEAAWALLSRLYLYMENNAKAI 227
            RSTV EVY Q+E DLL         +    SNV  AT+ AA ALL RLYLY   N K I
Sbjct: 192 SRSTVAEVYAQIEKDLLFGELNLPITQGTNFSNVARATRGAAQALLMRLYLYKGENTKVI 251

Query: 228 EYADMVINSG-KFNLVATEKLADYTKLAPESNSETIFAI 265
           EYAD V   G + N        DY         E+IF++
Sbjct: 252 EYADKVTALGYQLNAAPITAFRDYL------TKESIFSV 284



 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 16/133 (12%)

Query: 415 WSPVISRLAEMYLNRAEANAKMGN--DAAALDDVNMIRSRAGIPDVGLYTTANLGEKSVL 472
           W PV+ R  E+ L++AEA A+  +  +  A++ +N +R RA   +  +   A+  E  ++
Sbjct: 350 WIPVV-RYPEVILSKAEALARQSSAVNPEAIELINQLRRRAQASEFSVPDFASREE--LI 406

Query: 473 DVVLEERQLELAYEGHRKIDVFRNDRTMNREYPGTHLSGNNPIYTV-PANDNAVVEYLPE 531
           + +L ER++ELA+EGH   D  RN     ++ P + +      YTV P   N  +  +P+
Sbjct: 407 ETILLERRIELAFEGHGIFDRLRN----KKDIPASSM------YTVQPYGSNKTILPIPQ 456

Query: 532 GQLLIHDGLTQNP 544
             +  +  L QNP
Sbjct: 457 VDVQANPNLVQNP 469