Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 187 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 72.8 bits (177), Expect = 4e-18
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 21/183 (11%)

Query: 7   NSDKVAVNALRGGSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWKNRQQ 66
           +SD+     L+     AF++LF +Y K+++  + KM    E AE +VQEVF+++W+N   
Sbjct: 4   HSDEQLYQRLKQADHRAFDLLFDRYWKRLFEYAYKMLQDREQAEDVVQEVFVQLWENASN 63

Query: 67  LDSTLSFNAYLIAIVRSIVIRQLQRKANLTAYKKYSLQRMEDWDNQTEDQVIFSE----- 121
            +     + Y    V+  V       AN    KK+ +    DWD+   + ++ +E     
Sbjct: 64  RE-IQHLSGYFFRAVKYQV-------ANTVRNKKWHV----DWDSLELEGIMLTEETEQP 111

Query: 122 ----MMNVSSKVMDTLPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAMR 177
               ++    + ++ LPP  K +F +      +  EIA  L +S +TV+  + RA K+++
Sbjct: 112 QDTKLLQQLEQRIEQLPPKCKEIFYLNKKHGYTAKEIAASLNISPRTVEGHLQRALKSLK 171

Query: 178 LSL 180
             L
Sbjct: 172 ADL 174