Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 191 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 83.2 bits (204), Expect = 3e-21
 Identities = 49/156 (31%), Positives = 88/156 (56%), Gaps = 4/156 (2%)

Query: 16  LRGGSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWKNRQQLDSTLSFNA 75
           LR G  EAFN ++  Y KK+Y  + K     E AE +VQ+VF + W  R  L  T S  +
Sbjct: 12  LRHGDSEAFNAVYALYWKKLYFHAYKRVGTAELAEDMVQDVFFQFWLKRASLVITKSIES 71

Query: 76  YLIAIVRSIVIRQLQRKANLTAYKKYS--LQRMEDWDNQTEDQVIFSEMMNVSSKVMDTL 133
           YL+ ++++ ++   + K    A +KY   ++ +   D+ TE ++ + ++++   ++++ L
Sbjct: 72  YLMGMLKNKILMHFREK--YAASEKYDELVRHLSVHDSDTERRIDYGDLLSHVDELIERL 129

Query: 134 PPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQV 169
           P   K VF +   E +S  EIA++LQ+S KTV+  +
Sbjct: 130 PEQSKHVFRLSRKEFLSNMEIADRLQISVKTVEYHI 165