Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 191 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 81.3 bits (199), Expect = 1e-20
 Identities = 50/173 (28%), Positives = 94/173 (54%), Gaps = 3/173 (1%)

Query: 7   NSDKVAVNALRGGSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWKNRQQ 66
           +SD   ++ LR GS EAF  L+ KY +KIY +S  ++   E ++ IVQE+F+ +W  R++
Sbjct: 6   HSDMTLLDGLRQGSWEAFESLYDKYWEKIYAVSSAVTKDQELSKDIVQEIFLDLWNRREK 65

Query: 67  LDSTLSFNAYLIAIVRSIVIRQLQRKANLTAYKKYSLQRMEDWDNQTEDQVIFSEMMNVS 126
           L +  +  AYL    +  +I  ++++     + +   Q +       ED +   E+    
Sbjct: 66  L-AIKNLYAYLYQASKYRLIEHIRKQEQQEQFLEEFNQILSHC--PVEDYLFHKELELTI 122

Query: 127 SKVMDTLPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAMRLS 179
            + ++ L P  KR+F +   + +S  EI+++L++SK TV+N + +A   +R S
Sbjct: 123 KESLEELSPKCKRIFYLSRYDHLSNHEISQQLKISKSTVENHINKALNHLRNS 175