Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 180 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 72.0 bits (175), Expect = 6e-18
 Identities = 40/168 (23%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 13  VNALRGGSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWKNRQQLDSTLS 72
           + ++R     AF+ L+ +Y + +Y  +       + A+ +VQ++FI  W  R+ LD  +S
Sbjct: 11  LESIRNDDLRAFDQLYHQYWEVMYQAAVGRLKSQDLAQDVVQDIFIDFWNRRKSLDINVS 70

Query: 73  FNAYLIAIVRSIVIRQLQRKANLTAYKKYSLQRMEDWDNQTEDQVIFSEMMNVSSKVMDT 132
             AYL+  V+  V R++ +   L  +++ S   +E+  + +   + F E+ ++    ++ 
Sbjct: 71  LKAYLLTAVKYKVFRKVDK---LNRHEQLSASHLEEL-SASASFMEFEEIFDLIEVKLEQ 126

Query: 133 LPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAMRLSL 180
           L P   ++F M  +E +S+ EI+E++ ++ ++V N + +  K ++  L
Sbjct: 127 LAPMHHKIFRMNKMEGVSVREISEQVNMAPQSVHNVLSKTTKYLKKEL 174