Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 204 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 85.5 bits (210), Expect = 6e-22
 Identities = 54/183 (29%), Positives = 99/183 (54%), Gaps = 1/183 (0%)

Query: 1   MLDLGKNSDKVAVNALRGGSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKI 60
           M  L K ++K  V  +R G   AF+ L+ +Y+ ++Y  ++++    + AE  VQ VF+K+
Sbjct: 8   MRKLIKYTEKRLVALVREGDLNAFDELYHRYAPRVYGFAKRVFHDKDVAEEAVQVVFVKL 67

Query: 61  WKNRQQLDSTLSFNAYLIAIVRSIVIRQLQRKANLTAYKKYSLQRMEDWDNQTEDQVIFS 120
           W+ R+ L+  L+F +YL   V+  V  +L+   N    ++          +  E  + + 
Sbjct: 68  WEKRKGLNEQLNFKSYLFTAVKHQVYNRLREVKNTVDLEEMVTDHTYQGVSGLE-VLEYK 126

Query: 121 EMMNVSSKVMDTLPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAMRLSL 180
           E    +  +++ LP  Q++VF +  LE +S  EIAEKL +S +TV++  + A K ++  L
Sbjct: 127 EFEESALGLIERLPNVQQKVFKLSRLEGVSHKEIAEKLGLSVRTVEHHCYLATKFLKGQL 186

Query: 181 LEQ 183
           L+Q
Sbjct: 187 LKQ 189