Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 203 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 71.2 bits (173), Expect = 1e-17
 Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 9/165 (5%)

Query: 21  EEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWKNRQQLDSTLSFNAYLIAI 80
           ++A+  L ++Y K +Y +  KM    +DAE +  E F K ++N  +     +F+ +L  I
Sbjct: 28  QQAYATLMKRYKKAVYFMILKMIRDADDAEDLTMEAFAKAFRNLHKFKKDYTFSTWLFRI 87

Query: 81  VRSIVIRQLQRKANLTAYKKYSLQR---------MEDWDNQTEDQVIFSEMMNVSSKVMD 131
             +  I  +++K   T     +L           +ED DN  +D+ I S+ + +    +D
Sbjct: 88  ATNNTIDFIRKKKLKTMSLNNTLTDDGGNSVNIDVEDDDNNPQDEFIKSQRIEMVRIFVD 147

Query: 132 TLPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAM 176
            LP   +++  +R  +++S DEIA++L     TVK Q+ R+ + +
Sbjct: 148 KLPAKYRKLVKLRYFDELSYDEIAQELDKPLGTVKAQLHRSRELL 192