Pairwise Alignments

Query, 201 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 200 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 18/189 (9%)

Query: 9   DKVAVNALRGGSEEAFNVLFRKYSKKIYHISRKMSLGHEDAEGIVQEVFIKIWK--NRQQ 66
           D   +   R GSE AF VL  KY  +++     +      AE ++Q+VF+K+ +  N  +
Sbjct: 9   DSELIAQYRNGSEAAFEVLVDKYKSRVFTTIYMIVKDQGLAEDLLQDVFVKVIQTLNSDR 68

Query: 67  LDSTLSFNAYLIAIVRSIVIRQLQRKANLTAYKKYSLQRMEDW----------DNQTEDQ 116
            +    F  +L+ I  ++ +   ++       K+Y    MED           D+  EDQ
Sbjct: 69  YNEEGKFQPWLMRIAHNLAVDYFRKM------KRYPFIMMEDGSNLFNTLKFADSNVEDQ 122

Query: 117 VIFSEMMNVSSKVMDTLPPGQKRVFLMRNLEDMSLDEIAEKLQVSKKTVKNQVFRANKAM 176
            +  E   +   ++D LP  QK+V +MR+  D+S  EIA++  VS  T   ++  A   M
Sbjct: 123 QVKDETHALVRDLIDELPESQKQVLIMRHYMDLSFQEIADQTGVSINTALGRMRYALINM 182

Query: 177 RLSLLEQNI 185
           R  L + N+
Sbjct: 183 RKKLKQINV 191