Pairwise Alignments

Query, 410 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 349 a.a., Transposase IS116/IS110/IS902 family protein from Alteromonas macleodii MIT1002

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 102/373 (27%), Positives = 168/373 (45%), Gaps = 52/373 (13%)

Query: 15  CGLDVHQKTVVATVSGIDVEIDTRTFGTFTAQIEELKTWLNSLSITHIAMESTGVY---- 70
           CG+D+H + +   +      ID         +I++    L +L   ++     GV     
Sbjct: 12  CGIDLHTRLLYVCI------IDNENNILVHEKIDDSPDKLLALLKPYLGNIVVGVECMHC 65

Query: 71  WKPVYNILEE-DFKIILVNARHIKNVPGHKT--DKKDSEWIAKLLLSGLLKGSFVPTEWI 127
           W  V +  EE +   IL +A ++K +   KT  DK D+  IAKL+  G    +   ++  
Sbjct: 66  WYWVSDFCEEHNIDFILGHALYMKAIHAGKTKNDKIDALKIAKLMRGGNFPLAHAYSKEH 125

Query: 128 RELRDLCRYKRKLIAQRVAQRNRLHKILEDANIKLASVASDIFGVTGTLIIDAL-IRKQD 186
           R +RD             A R R H +   A +K A V+S I       +   L ++   
Sbjct: 126 RSIRD-------------ALRRRTHIMRMSAQLK-AHVSSTISQYNLPALESRLNLQNSP 171

Query: 187 DPEYLANLAKGSLRKKMADLKLSLQGRLTEHHRFMLATLRDSIDSINAQIGHIEARIERY 246
           D E + +       +K  DL L++                  I+++ +++  IE  ++  
Sbjct: 172 DREKMHHFFPDEAVQKSMDLNLNI------------------IETMVSELYKIEHYVKTQ 213

Query: 247 A-VELQQEVDLLQTIPGIGKETAMNILAESGNDMEVFPDHKHLASWAGVSPGNNESAGKK 305
           A      ++ +L++ PGIGK  A+ IL E G D++ FP  +  AS++ +     ESAGK 
Sbjct: 214 AQTHRATDLHILKSFPGIGKILALTILYEVG-DIKRFPSVQKFASYSRLVKCKAESAGKT 272

Query: 306 KSTRITH-GNKYLKTALVEAAWAASHTKDTYLGRKYGAIAARRGSK-KALIAVAHKILTG 363
             T+    GN +LK A  EAA    + K     ++Y A   +R SK KAL A+AHKI   
Sbjct: 273 HGTQGNKIGNAHLKWAFSEAA--VLYLKGNDNAKRYLAKLQKRMSKAKALSALAHKIGRC 330

Query: 364 LYYILKNKEPYLE 376
            Y++LKN++ + E
Sbjct: 331 TYFMLKNQQVFDE 343