Pairwise Alignments

Query, 292 a.a., Small-conductance mechanosensitive channel from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 374 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 58/276 (21%), Positives = 125/276 (45%), Gaps = 21/276 (7%)

Query: 21  FKVITFILLLWFSV-DLSKKLLPYISFIDNVLKAATFLLSSHIIISLGRLITVRFYLRKK 79
           F ++   LL+  S+ DL ++ L  +S +  V+ A    L ++  I LG    +  Y  + 
Sbjct: 71  FLLLLASLLVGLSMLDLPERWLTRVSSLWFVVAALQIGLWANRAIGLG----LSRYFARH 126

Query: 80  GQDPFRSNFVLGINHIAGILNVL--VLVISLMFLFGIDPGEFFTSITIVAAAIALLSKDY 137
             D       L      G   +L  V+V++++   G++   F  S+ +   A+AL  ++ 
Sbjct: 127 RTDGLNQGSALATLSAWGARVLLWSVVVLAMLSNLGVNITAFVASLGVGGIAVALAVQNI 186

Query: 138 ITNMINGLIIMFSDQLSLGDTVKIGDQQGKIQDVTLLNMVLVNEEADIVMIPNATILTSQ 197
           + ++   L I       +GD + IG   G ++ V L    + +   + +++ NA++++S 
Sbjct: 187 LGDLFASLSIAVDKPFEIGDFIVIGPLAGTVEHVGLKTTRIRSLGGEQIVMANASMISST 246

Query: 198 VINYSRQHHKKLTFEFEMSLKPTLEITS-----LEERLK-QVAFSFDKAIVKNTFTLKTT 251
           + NY R   +++ FEF +S     E        +E+ +K Q    FD+A ++        
Sbjct: 247 IQNYKRLQERRIVFEFGLSYDTPTEAVKKAPAIVEDAIKAQEQARFDRAHLRG------- 299

Query: 252 EIKHQTVQLKCQFLMAVSNKAIEKEIRRTINQTIIE 287
               + ++ +C +++      +  +I++ IN  ++E
Sbjct: 300 -FGKEALEFECVYIVQDPGYNLYMDIQQAINFRLLE 334