Pairwise Alignments

Query, 357 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 390 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Sphingobium sp. HT1-2

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 15/313 (4%)

Query: 39  ATKVTVAKAEQRSFDYLINASGKVEAGQEVMV-VIERQGYLKELSVQEGQYVEAGAVIAR 97
           A  V+V    Q      ++++G + A  ++ V V+   G +  + VQ G +V AG V+A 
Sbjct: 62  APVVSVLTPGQTMVARTVSSTGSLAARVDMPVGVVGEGGMVTRVLVQPGDWVRAGQVLAT 121

Query: 98  LDNT--DNVFRKEKALVQLKNAQASYNSEKLGFGSILEGEDQEQVLQLDEQL----KASS 151
           ++ +          A V+++ A A     +L     L G        +D++     +A +
Sbjct: 122 VERSVQSEQVNSLAAQVEVQRANAKLAQAQLERAKALVGRGFISAADIDQRTATRDQAVA 181

Query: 152 GLLSAEIELKEAELELAKATIKAPVSGKVADLQVKPGSLVNA-GDELCEVLNTHTLLLNV 210
            +  AE +L E      +  I+AP SG V    V+PG +V A G  L  +     + +  
Sbjct: 182 QVRVAEAQLAEQRARTGRLDIRAPASGLVLTRTVEPGQIVQAGGGTLFRMAKDGEMEMQA 241

Query: 211 KVLESDIPFISLGQTAEVYPVSAGTGTLSGKVGSINPKVD---ENGLVEVGIKLTGAQKL 267
           +V E+D+  +  G +A V PV +     SG+V  ++P VD     G+  + +    A  +
Sbjct: 242 QVAEADLATLRAGNSATVTPVGSNQ-HFSGRVWQVSPVVDPQTRQGIARIAVAYNDA--I 298

Query: 268 LPGMNARAVIRAPQSDNVVVPKQALVYRSGRPVVFTVNGK-EAKWNYVEVGKDNGREIEI 326
            PG  A A I +   +  ++P+ A+   +    V+ VNGK + +   V+VG+ +   + I
Sbjct: 299 RPGGFASATITSGSGNTPLLPESAVQSDAKGSYVYIVNGKNQVERRDVKVGQVSDTGVAI 358

Query: 327 LDGIKDGETVITS 339
             GI   E ++TS
Sbjct: 359 TSGITGAERIVTS 371