Pairwise Alignments

Query, 357 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score =  107 bits (268), Expect = 4e-28
 Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 30/336 (8%)

Query: 42  VTVAKAEQRSFDYLINASGKVEAGQEVMVVIERQGYLKELSVQEGQYVEAGAVIARLDNT 101
           V  A AEQR +   + A G ++A Q V + +E +G +K L    GQ V+AG ++ +L++ 
Sbjct: 65  VAAAMAEQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDD 124

Query: 102 DNVFRKEKALVQLKNAQASYNSEKLGFGSILEGEDQEQVLQLDEQLKASSGLLSAEIELK 161
                   AL  L  A+  +     G GS L G+      + D   + SS     +  ++
Sbjct: 125 QETALLGTALADLGLAKVDF-----GRGSQLVGDSAISRGEFD---RLSSQYRRNQAVVE 176

Query: 162 EAELELAKATIKAPVSGKVADLQVKPGSLVNAGDELCEVLNTHTLLLNVKVLESDIPFIS 221
           + + +  K  I AP SG +   QV  G  + AG  +  + +T +L ++  V E  +P +S
Sbjct: 177 QLKAQKIKKRINAPFSGTIGIRQVDIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLS 236

Query: 222 LGQTAEVYPVSAGTGTLSGKVGSINPKVDE--NGLVEVGIKLTGAQKLLPGMNARAVIRA 279
           LGQ   V   +       G + +INPKV+E    L+          KLLPGM A  +I  
Sbjct: 237 LGQQVLVQVAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILL 296

Query: 280 PQ-SDNVVVPKQALVY---------------RSGRPVVFTVNGKE---AKWNYVEVGKDN 320
           P     VVVP+ A+ Y               + G+P V+   G+    A+   V+ G+  
Sbjct: 297 PNPQPQVVVPESAITYTLYGNSVYVASPRKDKDGKP-VYDDKGQPQLVAEQRTVKTGERR 355

Query: 321 GREIEILDGIKDGETVITSNNLQLGHQAQIQIAKEN 356
              + + +G++ GE V+T+  L+L   A I+I ++N
Sbjct: 356 DGVVVVSEGLQAGEQVVTAGQLKLTPGAAIRIGQDN 391