Pairwise Alignments

Query, 503 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 23/291 (7%)

Query: 220 VLTEGSPVKEGQVLMTVSSTGLTSNNLGAE--IQKARADYEQAKSEYERKKELYESKIVP 277
           V  EGS VK+G VL  +      +++  A   + KA A   QA+ + +R +EL + K V 
Sbjct: 80  VYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQEQRYRELVDDKAVS 139

Query: 278 KSEFEQVEQKY-----QIAKTNYETLSSGYSGGGKQVTAPIGGFIKSIQAVNGGFANQGD 332
           + E++  +  +     ++A+       +  + G   VTAPI G I   Q   G    Q +
Sbjct: 140 RQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIGRAQVTEGALVGQNE 199

Query: 333 ALVTVTSHKSSLLEVQVSPKYSAELKNIRNIWYQPK-------EGAWSNLNEKG------ 379
                T  +   +   V+ + + EL  +R      +       +   + + + G      
Sbjct: 200 TTPLATIQQLDPIHADVT-QSTRELNALRRALRAGELQQVGDGQARATLIQDDGSAYPLP 258

Query: 380 GKILSVDKEVEANQPLISVFAEV-NEGVEMPEGSFTEAQLAVGSAMESLVIPVSCLMED- 437
           GK+L  D  V+ +   I++ +E  N  +++  GS+   +L      + L +P   ++ D 
Sbjct: 259 GKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKGLSVPQRAILRDS 318

Query: 438 YGNYSVIVQLSGESFERRNVTLGKRNGSEVEIIKGLSFGEVVVTKGAYQVK 488
            G   V+V         R V LG   G    + +GL+ GE VV +G   VK
Sbjct: 319 AGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVVEGLQHVK 369