Pairwise Alignments

Query, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 321 a.a., ribose ABC transporter permease from Serratia liquefaciens MT49

 Score =  290 bits (741), Expect = 4e-83
 Identities = 154/313 (49%), Positives = 216/313 (69%), Gaps = 15/313 (4%)

Query: 8   QSLIALIILCLVLSLLSDRFLTLANGWNVMRQVSVNICISVGMTLVILTAGIDLSVGSIL 67
           +SLIAL++L  V+S +S  F TL N +N+++Q SVN  ++VGMTLVILT+GIDLSVGS+L
Sbjct: 20  KSLIALLVLIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLL 79

Query: 68  ALCGAVTASLIKNGIAVEGLNLHIGFAPLGAVILGVGLGFGLGWFNGWTITRFKVPPFVA 127
           AL GAV AS++  G  V  +          AV   + LG  +G   G  + + KV  F+A
Sbjct: 80  ALTGAVAASIV--GFEVNAVV---------AVAAALALGAAVGACTGVIVAKGKVQAFIA 128

Query: 128 TLAMLTIARGLTMLWTGGFPIN----GLGEDFAFLGTGWFLGIPMPVWITAVIVALAVLL 183
           TL M+ + RG+TM++T G P+N     + + F + G G  LG+P P+WI A++   A  +
Sbjct: 129 TLVMMLLLRGVTMVYTNGSPVNTGFTDVADTFGWFGIGRPLGVPTPIWIMAIVFIAAWYM 188

Query: 184 TKKTKFGRYVYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDSAQPNA 243
              T+ GRY+YA+GGNE A RLSGI++ +VK+ VY++ G LAA+ G+I  +RL SAQP A
Sbjct: 189 LHHTRLGRYIYALGGNEAATRLSGISVDKVKIIVYSLCGLLAALAGVIEVARLSSAQPTA 248

Query: 244 GISYELDAIAAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQVVKGAV 303
           G  YELDAIAAVV+GGTSL+GGKG I+G ++G +I+G LNNGL LL VS ++Q +VK  V
Sbjct: 249 GTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVV 308

Query: 304 ILLAVVIDKANSK 316
           ILLAV+++  ++K
Sbjct: 309 ILLAVLVENKSNK 321