Pairwise Alignments

Query, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 329 a.a., ribose ABC transporter permease from Serratia liquefaciens MT49

 Score =  232 bits (591), Expect = 1e-65
 Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 11/304 (3%)

Query: 13  LIILCLVLSLLSDRFLTLANGWNVMRQVSVNICISVGMTLVILTAGIDLSVGSILALCGA 72
           LI++  V   ++  F T AN  N+ RQ S+NI ++ GMT +ILT GIDLSVGS+L     
Sbjct: 33  LILIVAVFGFVAPNFFTDANLLNIARQASINIVLAAGMTFIILTGGIDLSVGSMLGTTAV 92

Query: 73  VTASLIKNGIAVEGLNLHIGFAPLGAVILGVGLGFGLGWFNGWTITRFKVPPFVATLAML 132
           V  ++          +L  G A + ++ L +  G G+G FNG+ +    +PPF+ TL   
Sbjct: 93  VAMAV----------SLMPGMAGM-SIPLALLAGLGMGLFNGFLVAYAGLPPFIVTLGTY 141

Query: 133 TIARGLTMLWTGGFPINGLGEDFAFLGTGWFLGIPMPVWITAVIVALAVLLTKKTKFGRY 192
           T  RG   L   G  I      F ++G  +   IP  V I   ++A+   + ++T  G +
Sbjct: 142 TALRGAAYLLADGTTIINSNISFEWIGNAYLGPIPWLVIIAFAVIAVCWFILRRTTLGVH 201

Query: 193 VYAIGGNERAARLSGINISRVKMTVYAIAGGLAAVGGMIVTSRLDSAQPNAGISYELDAI 252
           +YA+GGN +AARL+GI +  V + VY ++G L+ +GG++  SRL SA  N G+ YELDAI
Sbjct: 202 IYAVGGNMQAARLTGIKVGAVLLFVYGMSGLLSGLGGVMSASRLYSANGNLGMGYELDAI 261

Query: 253 AAVVIGGTSLSGGKGTIMGAVLGGIIIGVLNNGLVLLNVSPFWQQVVKGAVILLAVVIDK 312
           AAV++GGTS  GG GTI G ++G +II  LNNG+ L+ VS FWQ V+KGAVI++AV+IDK
Sbjct: 262 AAVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDK 321

Query: 313 ANSK 316
             ++
Sbjct: 322 YRTR 325