Pairwise Alignments

Query, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 307 a.a., tyrosine recombinase XerC from Paraburkholderia sabiae LMG 24235

 Score =  147 bits (372), Expect = 2e-40
 Identities = 93/303 (30%), Positives = 163/303 (53%), Gaps = 20/303 (6%)

Query: 4   SFINYLEHEKRASAHTVLAYEKDLEQFKEFLE-QSFETADLTQAGHGEIRAWIVDLVEQG 62
           ++++ L+HE+R SAHT+ AY  +L++ K+    +  E+   T     +IR  +      G
Sbjct: 9   TYLSSLKHERRLSAHTLRAYTHELDELKKLANGRPLESLTAT-----DIRGAVARAHGGG 63

Query: 63  LSATTVNRKMATLRSFYKFLLRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQLLNDLE 122
           LSA ++  +++  R+FY++L    E+  +P   +RA K +K LP+ +      +L+ +  
Sbjct: 64  LSARSIGHRLSAWRAFYRWLAGRIELPANPVATVRAPKRAKTLPKALSVDDTHKLM-EAP 122

Query: 123 YEAGFEGQRDKMVMEFLYLTGVRLSELIGLTWKDIDIQG-----------KTVKVYGKRK 171
             A  EG RD  ++E  Y +G+RLSEL+GL     D+ G             V+V GK  
Sbjct: 123 ATATAEGLRDHAMLELFYSSGLRLSELVGLDVHFADVDGYRSTGWLKLDDAEVEVLGKGN 182

Query: 172 KQRIIPLTNTLIENIISYKKDFKETFSNVNESDYFIVTISKKQAYPMIIYRIVRKYLDLF 231
           ++R +P+ +  ++ + ++     E   +  +     V++   +  P ++   V++     
Sbjct: 183 RRRSVPVGSKALDALRAWLAVRGELVKH--DPHPLFVSVRGNRMSPNVVRDRVKRAALTA 240

Query: 232 AQTSKRSPHLLRHTFATHLLNKGADLNAVKDLLGHANLAATQVYTHNSMEKLKAVFDQAH 291
              +   PH+LRH+FATH+L    DL AV++LLGHA++AATQVYT    + L  ++DQAH
Sbjct: 241 GIPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASIAATQVYTGLDFQHLARIYDQAH 300

Query: 292 PKA 294
           P+A
Sbjct: 301 PRA 303