Pairwise Alignments

Query, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pectobacterium carotovorum WPP14

 Score =  173 bits (439), Expect = 4e-48
 Identities = 102/295 (34%), Positives = 167/295 (56%), Gaps = 4/295 (1%)

Query: 1   MLFSFINYLEHEKRASAHTVLAYEKDLEQFKEFLEQSFETADLTQAGHGEIRAWIVDLVE 60
           ++  F++ L  E+  + +T+ +Y  DL    E++  +     L QA   +++A++ D VE
Sbjct: 8   LIEQFLDALWLERNLAENTLASYRLDLRTLAEWV--AHHENGLLQAQSLDLQAFLADRVE 65

Query: 61  QGLSATTVNRKMATLRSFYKFLLRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQLLND 120
            G  AT+  R ++ +R F+++L R    + DP+  L + K  ++LP+ + E+ +D LLN 
Sbjct: 66  GGYKATSSARLLSAMRRFFQYLYREKLRSDDPSAVLSSPKLPQRLPKDLSEAQVDALLNA 125

Query: 121 LEYEAGFEGQRDKMVMEFLYLTGVRLSELIGLTWKDIDIQGKTVKVYGKRKKQRIIPLTN 180
              E   E  RDK ++E LY TG+R+SEL+ LT  D+ ++   V+V GK  K+R++PL  
Sbjct: 126 PSIEQPLE-LRDKAMLEVLYATGLRVSELVSLTMSDVSLRQGVVRVLGKGNKERLVPLGE 184

Query: 181 TLIENIISYKKDFKETFSNVNESDYFIVTISKKQAYPMIIYRIVRKYLDLFA-QTSKRSP 239
             +  I  Y +  +    N    D    +   +Q      +  ++ Y  L +  + K SP
Sbjct: 185 EAVYWIEYYLEHGRPWLLNGQTLDVLFPSSRARQMTRQTFWHRIKHYAVLASIDSEKLSP 244

Query: 240 HLLRHTFATHLLNKGADLNAVKDLLGHANLAATQVYTHNSMEKLKAVFDQAHPKA 294
           H+LRH FATHLLN GADL  V+ LLGH++L+ TQ+YTH + E+LK +  Q HP+A
Sbjct: 245 HVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA 299