Pairwise Alignments

Query, 263 a.a., Uncharacterized membrane protein (homolog of Drosophila rhomboid) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 259 a.a., rhomboid family intramembrane serine protease from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  244 bits (624), Expect = 1e-69
 Identities = 124/266 (46%), Positives = 177/266 (66%), Gaps = 15/266 (5%)

Query: 4   SLTPVVKNLLLINVGLYVVASFLLPQLDGL-----FALYYIESKYFMPFQFLTYMFMHAG 58
           ++TP+V+NLL+INV ++++      QL GL     FALYY  S  F P Q  T+MFMH G
Sbjct: 3   NITPMVRNLLIINVVVFLL------QLSGLISVENFALYYFGSDMFQPVQLFTHMFMHGG 56

Query: 59  LWHLISNMFGLFIFGPLLEQFLGPKKLLTLWMVCGVGAGVLYSGYTAFQMNQLNQKVETF 118
             HL SNMF LFIFGPLLE+F GP++ L  +++ G+GA +LYSG  A+++N L ++  T+
Sbjct: 57  WAHLFSNMFSLFIFGPLLERFWGPQRFLAFYLITGLGASLLYSGVRAYELNGLEEETATY 116

Query: 119 YNNPDPEVFNQFVSDN-SYMFNNSVYDFIDKFSRDPSNETYVQNAKSIMNNIRDQKSNIP 177
             +P+P  F  ++ ++ S  +N    +F  +F R+P N TYV+ +K  +  +  Q  N P
Sbjct: 117 MLDPEPMKFYNYMEEHYSGRYNT---EFAVEFRRNPDNPTYVEESKEAVRYVYSQVFNSP 173

Query: 178 MVGASGALFGVLVAFGMLFPNTQLFLLFPPMPIKAKYLVLFYGLYTVYNIIVNNPTDNVA 237
           M+GASGA+FG+L+AFG+LFPN +L LLF P+PIKAKY VLFYG + +Y+     P DNVA
Sbjct: 174 MLGASGAVFGILMAFGLLFPNLELMLLFLPIPIKAKYFVLFYGAFELYSGFNRVPGDNVA 233

Query: 238 HFAHFSGLIIGAILVTFWKKDRTSFY 263
           HFAH  G++   ILV  W+++  S Y
Sbjct: 234 HFAHLGGMLFAYILVRMWQRNDYSNY 259