Pairwise Alignments

Query, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 373 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

 Score =  134 bits (337), Expect = 4e-36
 Identities = 91/362 (25%), Positives = 175/362 (48%), Gaps = 13/362 (3%)

Query: 3   KQTKILVIVAIVVVIAVIFLFPRLQGGDTSKEPSKSPQSTPEAMTALPVDVVEVTPERLE 62
           K+  I+++ A+ +V   ++ F +L      K+   S +  P+ +      V  +TP   +
Sbjct: 2   KKRMIIMLAAVALVFGALYGF-QLFKASMIKQALASLRDPPQTVATT---VATLTP--WQ 55

Query: 63  NNLNVTGNVLSNESVSLRAEITGLVESINFEEGQFVKKGTPLVYLNDDELTAQLDRLEYT 122
           + +   G+V +     L  E +G V  INF+ G  V++G  L+ L D++  A L  L+ T
Sbjct: 56  STVKAVGSVRAEAGADLALESSGTVAKINFKSGDEVREGQVLLQLRDEQEVANLAALKAT 115

Query: 123 KKLYEGQESRQKQLLAREAISQEEYDIILNQYNTTLSDIKLVKAQLDKTVIKAPFDGVLG 182
             +     +R ++ L   A+SQ   D         L+ +   +A ++K  +KAPF G LG
Sbjct: 116 ADVSAIILNRDQEQLKIHAVSQATIDSDTANLKKALAQVAEQQAVVEKKTLKAPFSGRLG 175

Query: 183 LRQISAGSVISTTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIEFSNNASHGLK-KGK 241
           +R +  G  +S    +  + +++PI I+F +P++  ++V+ G T++ + +   G   +G 
Sbjct: 176 IRSVDLGQYVSAGTTVVTLQSLNPIFIDFYLPQQALAEVKAGQTVKATVDTYPGQAFEGT 235

Query: 242 VYAYEPVIDANTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPSQSLIPELNG 301
           V A  P +D  +R + LRA   N+D +  PGMF  +   +   +  + VP  +++    G
Sbjct: 236 VTAISPKVDVTSRNVQLRAEFRNDDHRLTPGMFATVEVAVGTPDAFVTVPQTAIMANPYG 295

Query: 302 YKLFLV-NQEG-----IVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEGMKVK 355
             +F+V  +EG       ++  V+ G     ++ +L G+  G+ V+  G ++   G  V 
Sbjct: 296 DIVFVVEKKEGSATGLAARQVFVKTGATRGDQIAVLSGIKAGDQVVAAGQMKLHNGSLVS 355

Query: 356 YN 357
            N
Sbjct: 356 VN 357