Pairwise Alignments

Query, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 4e-41
 Identities = 99/365 (27%), Positives = 177/365 (48%), Gaps = 17/365 (4%)

Query: 13  IVVVIAVIFLFPRLQGGDTSKEPSKSPQSTPEAMTALPVDVVEVTPERLENNLNVTGNVL 72
           +++++AV+ L     GG  +    +  Q        + V          +  L   G++ 
Sbjct: 27  MLIMLAVVLLIVLALGGYKAFSIYQQIQMFTAPKPPITVAAAMAEQRPWQERLPAVGSLK 86

Query: 73  SNESVSLRAEITGLVESINFEEGQFVKKGTPLVYLNDDELTAQLDRLEYTKKLYEGQESR 132
           + + V L  E+ G+V+S++F+ GQ VK G  L+ LNDD+ TA L        L +    R
Sbjct: 87  ALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDDQETALLGTALADLGLAKVDFGR 146

Query: 133 QKQLLAREAISQEEYDIILNQYNTTLSDIKLVKAQLDKTVIKAPFDGVLGLRQISAGSVI 192
             QL+   AIS+ E+D + +QY    + ++ +KAQ  K  I APF G +G+RQ+  G  +
Sbjct: 147 GSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRINAPFSGTIGIRQVDIGQYL 206

Query: 193 STTDIIANIVNIDPIKIEFSIPERYASQVQVGSTIEFSNNASHGLK-KGKVYAYEPVIDA 251
           +   +IA + +   + ++F++PE+    + +G  +     A  G +  G + A  P ++ 
Sbjct: 207 AAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQRFPGSLSAINPKVEE 266

Query: 252 NTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPSQSLIPELNGYKLFLV---- 307
            TR L +RA   N D K LPGMF ++   L   +  ++VP  ++   L G  +++     
Sbjct: 267 TTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVYVASPRK 326

Query: 308 NQEG------------IVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEGMKVK 355
           +++G            + ++R V+ G R D  V + +GL  GE V+T G L+   G  ++
Sbjct: 327 DKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKLTPGAAIR 386

Query: 356 YNKIN 360
             + N
Sbjct: 387 IGQDN 391