Pairwise Alignments

Query, 600 a.a., excinuclease ABC, C subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 608 a.a., excinuclease ABC subunit UvrC from Rhodanobacter sp. FW510-T8

 Score =  291 bits (746), Expect = 4e-83
 Identities = 196/606 (32%), Positives = 313/606 (51%), Gaps = 34/606 (5%)

Query: 2   QSPSYSPEEYQK-LPDVPGVYKYYNEEDKLIYVGKAKSLKKRVASYFVKSTGLNLKTRRM 60
           Q P +  + + + L   PGVY++++   +L+YVGKA +L+KRV SYF+K   +  +   M
Sbjct: 5   QPPPFDGKAFVRTLTTSPGVYRHFDAAGELLYVGKAGNLRKRVGSYFLKPR-MEPRIAAM 63

Query: 61  VKEIRRIEFTIVNSEFDALLLENNLIKKNQPRYNILLKDDKTYPYLLLTK-EHFPQLYPT 119
           V +I R+E T+  +E +ALLLE+ LIK  +PRYNILL+DDK+YPY+ L+  E +P+L   
Sbjct: 64  VAQIARVEITVTRTEGEALLLESQLIKSLKPRYNILLRDDKSYPYIYLSSGEDYPRLAFH 123

Query: 120 RKLIPSRGTYFGPFASVKAMNNILELIRSLFTIRTCKLDLNPYKIAEQKYKVCLEYHIGN 179
           R      G YFGP+ S  A+   L L++ LF +R C+           + + CL+Y IG 
Sbjct: 124 RGAKNLPGRYFGPYPSTYAVRESLSLMQKLFKVRQCE-----DSYFRNRTRPCLQYQIGR 178

Query: 180 CLGPCEGLQGEPDYLKDIDQAKHILKGNLGIPKAYFKSKMQEAAEDLAFEKAQRFKDKLD 239
           C  PC GL    DY  D+  A+  L+G            M++A++ L FE+A + +D++ 
Sbjct: 179 CSAPCVGLISVEDYRNDVRHAEMFLEGRSNAVIDELAEAMEQASKALQFERAAKLRDQVA 238

Query: 240 LLEKYQAKSLVTNPHVTDLDVFAIVSADKFAFVNYLNIKNGAINITKTVELKKKLDETEQ 299
            L + QA+  V      D+DV A       A V+ L  +NG    T+    +  LD    
Sbjct: 239 ALRQLQAQHHVQGASA-DMDVIACRIEAGMACVSVLFFRNGISLGTRDFFPRLPLDAEPA 297

Query: 300 ELLLTAIFRLKDQFQSDAKEILSNIDLDDPI----------EGLHLTVPKIGDKRKLVEL 349
           ++L+  I +         + IL     D  I            + L     G++ + +++
Sbjct: 298 DVLVQFIAQYYLDRPVPRELILGEPLADQAILAELLGQHAGHAVELKSSVRGERAQFLQM 357

Query: 350 ALKNAMYYKKEKALLSGK--AKEKKNRVILQLQKDLSLKEAPDHIECFDNSNIQGAYPVA 407
           A +NA      +A L+ +  +++        LQK L L  +P  IECFD S+  G   VA
Sbjct: 358 AERNA------QASLTARLASRQTLGTRFDDLQKVLGLAASPRRIECFDISHTMGELTVA 411

Query: 408 SMVCFMDGKPAKKEYRHFHVKTVEGPDDFASMTEIVGRRYKRLLKENKPLPKLIVIDGGK 467
           S V F    P K  YR F++  +   DD+A+M + + RR++++ +     P +++IDGG 
Sbjct: 412 SCVVFGPEGPEKSHYRRFNISGITPGDDYAAMHQALTRRFRKVAEGEGARPDVLLIDGGG 471

Query: 468 GQLSAAVEALKSLDIYGQVPIIGIAK------KLEEIYFPGDSFPLHIDKKSESLRLIQR 521
           GQ++ A++ LK L + G + ++G+AK        E +        LH    S +L L+  
Sbjct: 472 GQVAQALDVLKELGVDG-IQVVGVAKGPGRRAGEETLVLADSGRELHPGSSSPALHLVAA 530

Query: 522 VRDEAHRFAITFHRDIRSKDSFKTALDTIEGIGPSTSNKLLKHYKSLKKIREASEEDLAQ 581
           VRDEAHRFAI+ HR  R K   ++ L+ + GIG    + LLK +  ++ +  A  E+L Q
Sbjct: 531 VRDEAHRFAISGHRKRREKARERSVLEDVPGIGARRRSALLKAFGGMQGLERAGVEELMQ 590

Query: 582 IIGKDK 587
           + G D+
Sbjct: 591 VKGIDR 596