Pairwise Alignments

Query, 600 a.a., excinuclease ABC, C subunit from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 607 a.a., Excinuclease ABC subunit C from Pseudomonas fluorescens GW456-L13

 Score =  301 bits (770), Expect = 7e-86
 Identities = 199/590 (33%), Positives = 317/590 (53%), Gaps = 33/590 (5%)

Query: 18  PGVYKYYNEEDKLIYVGKAKSLKKRVASYFVKSTGLNLKTRRMVKEIRRIEFTIVNSEFD 77
           PGVY+ ++ E +L+YVGKAK+LK R++SYF K TGL  KT  +V  I ++E TI  +E +
Sbjct: 18  PGVYRMFDSEARLLYVGKAKNLKNRLSSYFRK-TGLAPKTAALVARIAQVETTITANETE 76

Query: 78  ALLLENNLIKKNQPRYNILLKDDKTYPYLLLTKEHFPQLYPTRKLIPSRGTYFGPFASVK 137
           ALLLE  LIK+ +P YNILL+DDK+YPY+ L+   FP+L   R    ++G YFGP+ S  
Sbjct: 77  ALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLSIHRGAKKAKGKYFGPYPSAG 136

Query: 138 AMNNILELIRSLFTIRTCKLDLNPYKIAEQKYKVCLEYHIGNCLGPCEGLQGEPDYLKDI 197
           A+   L L++  F +R C  + + YK    + + CL+Y I  C  PC GL     Y +D+
Sbjct: 137 AIRESLSLLQKTFFVRQC--EDSYYK---NRTRPCLQYQIKRCKAPCVGLVEPQVYAEDV 191

Query: 198 DQAKHILKGNLGIPKAYFKSKMQEAAEDLAFEKAQRFKDKLDLLEKYQAKSLVTNPHVTD 257
             +   L+G          + M+EAA +L FE+A   +D++ LL + Q +  +      D
Sbjct: 192 RHSVMFLEGRSNALTDELSAGMEEAAINLEFERAAELRDQIALLRRVQDQQSMEG-GTGD 250

Query: 258 LDVFAIVSADKFAFVNYLNIKNGAINITKTVELKKKLDETEQELLLTAI--FRLKDQFQS 315
           +DV A       A V+ ++++ G +  +K    +  ++E   E++   +  + +    + 
Sbjct: 251 VDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEDVSEVMAAFLGQYFISSPERD 310

Query: 316 DAKEILSNIDLD---------DPIEGLHLTVPK--IGDKRKLVELALKNAMYYKKEKALL 364
              E++ N+  D         D + G  LT+     G + +  +LA+ NA     E+AL 
Sbjct: 311 LPSELIVNVVHDDFPTLIAAIDELRGRELTISHRVRGTRARWQQLAVTNA-----EQALS 365

Query: 365 SGKAKEKKNRVILQ-LQKDLSLKEAPDHIECFDNSNIQGAYPVASMVCFMDGKPAKKEYR 423
           +  A  +        L + L L E P  +EC+D S+  G   VAS V F    P K +YR
Sbjct: 366 ARLANRQHITARFDALAEVLKLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKADYR 425

Query: 424 HFHVKTVEGPDDFASMTEIVGRRYKRLLKENKPLPKLIVIDGGKGQLSAAVEALKSLDIY 483
            ++++ V   DD+A+M + + RR+ +L      LP ++++DGGKGQLS A + L  L + 
Sbjct: 426 RYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLDELAVP 485

Query: 484 GQVPIIGIAK------KLEEIYFPGDSFPLHIDKKSESLRLIQRVRDEAHRFAITFHRDI 537
             + ++G+AK        E +Y    +    +   S +L LIQ++RDEAHRFAIT HR  
Sbjct: 486 DLI-LLGVAKGATRKAGFETLYLNDAAHEFTLRGDSPALHLIQQIRDEAHRFAITGHRAR 544

Query: 538 RSKDSFKTALDTIEGIGPSTSNKLLKHYKSLKKIREASEEDLAQIIGKDK 587
           R K    + L+ + G+GP+    LLKH+  L+++  AS E++A+  G  K
Sbjct: 545 RGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIEEIAKAPGISK 594