Pairwise Alignments

Query, 392 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 398 a.a., Relaxase/Mobilisation nuclease domain. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 15/199 (7%)

Query: 1   MIAKQSIGKNFIGALDYNLKKLVVKDEGRRAEVLET-NFTSLDREI-IQKEVELMKSM-- 56
           M+A+ + GK   G L YN  K+    E R+A+ L    +   D E+  QK++   + +  
Sbjct: 1   MVARITSGKTIRGVLHYNENKV----EKRQAKFLGACGYLRQDEELDFQKKLARFQKIIE 56

Query: 57  -NPRLKRNTYHVSLSFPKEEKIPNEKMLSIAGEYLKGMGFDDNAYFIFRHHDADHPHCHL 115
            N R K N  H+SL+F   +K+    +  I  +Y++G+GF +  Y ++RH DA HPH H+
Sbjct: 57  TNTRAKTNALHISLNFSPRDKVDEPLLWKITEDYMRGIGFGEQPYLVYRHFDAAHPHIHV 116

Query: 116 LTLRNRFDGTVVSDSNNYR-KSESLVRKLEKKYGLQQVKSSKEAKVK-APNKDEIEMVIR 173
           +T   R DG  +   N  R +SE   + +E++YGL + +  +   V    + D+ E    
Sbjct: 117 VTTNIREDGQRIETHNLGRVQSEKTRKDIEQRYGLVKAEEQQRKHVNLLQSLDKAEY--- 173

Query: 174 TGKPSKKMVLQQIVGEALK 192
            GK   K  +  IVGE ++
Sbjct: 174 -GKTETKAAISNIVGEVVR 191



 Score = 41.2 bits (95), Expect = 5e-08
 Identities = 63/290 (21%), Positives = 118/290 (40%), Gaps = 44/290 (15%)

Query: 24  VKDEGRRAEVLETNFTSLDREIIQKEVELMKSMNPRLKRNTYHVSL--SFPKEEKIPNEK 81
           ++++G+R E    N   +  E  +K++E    +    ++   HV+L  S  K E    E 
Sbjct: 121 IREDGQRIET--HNLGRVQSEKTRKDIEQRYGLVKAEEQQRKHVNLLQSLDKAEYGKTET 178

Query: 82  MLSIA---GEYLKGMGFDDNAYFIFRHHDADHPHCHLLTLRNRFDGTVV---SDSNNYRK 135
             +I+   GE ++   F   A               L  +  +F+ T      DS  Y+K
Sbjct: 179 KAAISNIVGEVVRHYKFTSLA--------------ELNAILRQFNVTAYRGEEDSKMYQK 224

Query: 136 SESLVRKLEKKYGLQQVKSSKEAKVKA-PNKDEIEMVI---RTGKPSKKMVLQQIVGEAL 191
            + L+  +    G ++    K + + + P   ++EM     RT + + +  L+  V +AL
Sbjct: 225 -KGLIYSISDANGNRRGVPIKASSIYSKPTYKKLEMKFELNRTARKNYRNQLRSTVNDAL 283

Query: 192 KQTNTIEDFIHQVEASGANLLFNQASTGRVSGVAYCYDGFKA--KGQSLGNQFKWKNIAN 249
            +++++ED   ++   G +L   +   G+V G+ +     +    G SLG +F    I  
Sbjct: 284 TRSSSLEDLQVKLRKKGVHLTVRKNEEGKVYGITFTDHIHRCVFNGSSLGKEFSANGIQK 343

Query: 250 TL----------HYEQTRDCQAIGQANARTTSKY---PGGLSGNDKKTTR 286
            +          H +QT + Q+        TS Y   P  LS   +K  R
Sbjct: 344 AMMVKHTDEPQTHKQQTGENQSFSFPTNPQTSGYEPTPYELSQKKRKKKR 393