Pairwise Alignments

Query, 528 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 537 a.a., RagB/SusD family nutrient uptake outer membrane protein from Phocaeicola dorei CL03T12C01

 Score =  157 bits (397), Expect = 9e-43
 Identities = 155/553 (28%), Positives = 244/553 (44%), Gaps = 65/553 (11%)

Query: 1   MSYKSYIFIFLLGILG-TSCEDFLSTEPTNFIAPE--YSTIAELETGLAGVY-DVLGSQA 56
           ++++S IFI    I+   SC D LS     FI P   Y+T  EL++ L  VY D     A
Sbjct: 13  VNWRSKIFILFFTIVSFVSCTD-LSESTYTFINPGTYYNTEEELQSALNSVYADFRKFTA 71

Query: 57  TYGDVIPYWLNV-------STDIGYTNTGQLNTTAYIYTATDAQITNLWKTLYQGIYRAN 109
            Y  ++   L         S+  G  N    N+   +  +T   I  +W + Y+ I R N
Sbjct: 72  GYKTLMTLELLTEHAMPAHSSKDGVKN---FNSWQGVNQSTTYNI-QIWDSGYELINRCN 127

Query: 110 LVLAKVDNPELDEEARNRIKGQALFLRGYYYFLLVKNYGSVPMLLTDKPDISNVNIPRSP 169
           +VL + D   ++E+ RN+I GQA F R Y  F+L++ YG + +  +    ++ + IPR  
Sbjct: 128 VVLGRGDKVNIEEKKRNQIYGQARFFRAYTMFVLLRIYGGLAIPESYTSGLNGLEIPRKT 187

Query: 170 VEDVYTQILQDMKEAESLVEEAEHLSGGG--RISRSTVQGILARVCLTMAGHPLKDESRY 227
           +++ Y  I+ D+K     +        G   + S+   Q +L  V LT       + + +
Sbjct: 188 IDETYDYIIDDLKYCIDNLPSRSQWGNGAYYKASKGAAQALLGDVYLTRGCMDNYNTTYF 247

Query: 228 AEALEWAQKVQKSKMHELNPDYSNVFIRYARD-EYDIKESIWEVEFYGLLSSGSQEYTYY 286
            EA ++   V  S  +EL PDY +++  +  +   + KES+ E++F    +  S  + Y+
Sbjct: 248 QEAKKYLGDVISSGEYELLPDYKSLWYWFVEEAAKNTKESLLEIQFGA--TQVSDLHCYF 305

Query: 287 IGARGGIRSGDEQIG--YSGGAVLATKWLFDLYEIDEGSTETPKESPDLRRDWNIAPFTY 344
                GI + DE +G      A +A K  F              +  D+R+   +  +T 
Sbjct: 306 -----GINTKDECLGGKMYARAGIAHKSYFSF------------QDEDVRKQCFLTEYTI 348

Query: 345 VGVPGVQTYNPD----------LWRRTMGKWRREYE-TLTPKDRVVSAQNFPILRYSDVL 393
            G    + + P+          +W  T     + Y+ T +  D   S  N+  +RYSDVL
Sbjct: 349 TGTTTRRWWEPEYKGFSGKGEGMWPSTSPGCVKFYDRTKSCYDTGGSKANYIAMRYSDVL 408

Query: 394 LMIAEAENEVNGPTDVAYEAINQVRRRAYGLLLPAPPNPDVNADLPPGLSKEEFFQAIVD 453
           L  AE EN +NGPT+ AY  +N V  R+         NP     +  GLSKE F  AI  
Sbjct: 409 LNYAEVENYLNGPTEDAYSKLNAVHNRSNS-------NP-----IATGLSKEAFDDAIFQ 456

Query: 454 ERAREFCFEASRRSDYIRWGTFVDRMKEYKDWALANGAVQGHVLAQTNISERNYLLPIPT 513
           ER  EF  E     D +R       + EYK +   NG      L    + ++ +L  IP 
Sbjct: 457 ERVWEFIGEGHLYYDELRTNRLGKNVYEYKTYMFENGYYNCQKL--QFVPQKTFLWKIPQ 514

Query: 514 AEMALNKALTQNP 526
             +  N AL QNP
Sbjct: 515 TSLDSNPALEQNP 527