Pairwise Alignments

Query, 818 a.a., Type I site-specific restriction-modification system, R (restriction) subunit and related helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 779 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score =  964 bits (2493), Expect = 0.0
 Identities = 486/812 (59%), Positives = 609/812 (75%), Gaps = 42/812 (5%)

Query: 7   LSERDICTKFITPAIEKAGWDKTTQLLEEVSFTDGKIYVRGRLTARGKRKRADYILYYKP 66
           LSERDICTKFITPAI++AGWD  TQ+ EEVSFT+G+I VRG+L +RG+RKRADYILYYK 
Sbjct: 5   LSERDICTKFITPAIQQAGWDIQTQVREEVSFTNGRIIVRGKLHSRGERKRADYILYYKT 64

Query: 67  NIPIAIVEAKDNRHSVRAGLQQALDYAEILDIPCVFSSNGDGFVFHDRTATDGNIETELD 126
           NIPIAI+EAKDN +SV AG+QQAL+YAEIL+IP VFSSNGD F+ HDRT    ++E EL 
Sbjct: 65  NIPIAIIEAKDNSYSVGAGMQQALNYAEILEIPFVFSSNGDAFLMHDRTGNAQSLEQELT 124

Query: 127 IDSFPSPEELLKKYKQYKGIHTSEAQEVALQDYYFDGSGRSPRYYQQIAVNRTVEAVANG 186
           +D FPSPE+L ++Y  +KGI T EA+      YY DG+GR+PRYYQ  A+N+T+EAVA G
Sbjct: 125 LDQFPSPEDLWQRYCDWKGIVTEEAKATVEMPYYDDGTGRAPRYYQANAINKTIEAVAKG 184

Query: 187 QGRILLVMATGTGKTYTAFQIIHRLWKSRAKKRILFLADRTALIDQTRRGDFKHFKDKMT 246
           Q R+LLVMATGTGKTYTAFQII RLWKS AKKRILFLADR  L+DQT+  DFK F   MT
Sbjct: 185 QQRVLLVMATGTGKTYTAFQIIWRLWKSGAKKRILFLADRNILVDQTKNNDFKPFGAAMT 244

Query: 247 IIKKKVVSRADGKEELVSNNKRGIDTEDKAYEVFLGLYQGLTNASDIEDAYKDFSPEFFD 306
            I K+ +                    DKAYE++L LYQ +T   + ++ YK FSP+FFD
Sbjct: 245 KISKRQI--------------------DKAYEIYLSLYQAVTGNEEDKNIYKQFSPDFFD 284

Query: 307 LIVIDECHRGSAKEDSAWREILRYFNKATHIGLTATPKETKEVSNIEYFGDPIYTYSLKQ 366
           LIV+DECHRGSA EDSAWRE+L YFNKATHIGLTATPKETKEVS+I YFG+P+Y+Y+LKQ
Sbjct: 285 LIVVDECHRGSAAEDSAWREVLEYFNKATHIGLTATPKETKEVSSITYFGEPVYSYTLKQ 344

Query: 367 GIDDGFLAPYRVVRVNLNVDAEGWRPEQGKKDKDGKEVEDRVYNRKDFDKTLVIDERTQT 426
           GI+DGFLAPY+VVR++L+ D +GWRP  G+ DK G+ ++DR+YN+ D D+TLV+++RTQ 
Sbjct: 345 GIEDGFLAPYKVVRIDLDKDLQGWRPTAGQTDKRGQLIKDRIYNQSDMDRTLVLEQRTQL 404

Query: 427 VARKLTEFLKGYDRFAKTIVFCSDIDHAERMRFALSNLNADLVAKNHKYIMQITGDNDEG 486
           VA+K+TEFL+  D +AKTIVFC DIDHAERMR AL NLN D V +N KY+M+ITGD +EG
Sbjct: 405 VAQKITEFLRETDPYAKTIVFCDDIDHAERMRQALVNLNPDRVKENRKYVMRITGDENEG 464

Query: 487 KRELDNFINPEETYPVIATTSELMTTGVDAQTCRVIVLDAEIKSMTKFKQIVGRGTRINE 546
           K ELDNFINPEE YPVIATTS+LMTTGVDAQTC+++VLD  IKSMT+FKQI+GRGTRINE
Sbjct: 465 KAELDNFINPEERYPVIATTSKLMTTGVDAQTCKLVVLDQHIKSMTEFKQIIGRGTRINE 524

Query: 547 EFGKMFFTILDFRNVTDLFADKDFDGDPIRVKPVSEDTDLTNIVDEEQSIDSLIIDEETG 606
           ++GK +FTI+DF+  T+LFADK FDG+P+             ++ E +   S +      
Sbjct: 525 DYGKFWFTIMDFKKATELFADKKFDGEPV-------------VIFEPKDGQSPV----PP 567

Query: 607 EEIEIGTKIRYPEPQTR--TSKVNEPRQKV--YVNGVDVSVLISREMYFDTNGKPITTSL 662
           +EIE  T +  P P T   T   +EP+ +V   V+ V V V+  R  Y+   GK IT S+
Sbjct: 568 DEIEDPT-LPLPNPDTPDITGGDDEPKGRVRYVVDNVAVHVVAQRVQYYGPEGKLITESI 626

Query: 663 KDHTKELIKGQYASLDDFLARWNSTDKKEIIIKELEEQGVLVEALRDAVNREVDLFDLIC 722
           +D+TK  ++  Y SLD FL  W + ++K  +I+E E  G+L++AL + V ++ D FDL+C
Sbjct: 627 RDYTKSKVQKDYQSLDQFLKTWTNAERKAALIQEFESHGILLDALAEEVGKDFDPFDLVC 686

Query: 723 HVAFEQPPLTRKERANNVKKRDYFTKYGDQARKVLETLLDKYADEGVTNIESMDILKVKP 782
           HVAF+QPPLTRKERA  VKKR+YF KYG+QA++VLE LLDKYAD GV NIE + IL + P
Sbjct: 687 HVAFDQPPLTRKERAEQVKKRNYFAKYGEQAKQVLEALLDKYADTGVENIEDIKILTLDP 746

Query: 783 LTDYGSPLEIIKQFGSKAKYLEAVKELEQELY 814
               GS  E+I  FG K  YL A+KELEQ+LY
Sbjct: 747 FRTMGSTPELIAAFGGKQGYLNALKELEQQLY 778