Pairwise Alignments

Query, 818 a.a., Type I site-specific restriction-modification system, R (restriction) subunit and related helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 601 a.a., DEAD/DEAH box helicase from Dickeya dianthicola ME23

 Score = 71.6 bits (174), Expect = 1e-16
 Identities = 103/441 (23%), Positives = 181/441 (41%), Gaps = 81/441 (18%)

Query: 169 RYYQQIAVNRTVEAVANGQGRILLVMATGTGKTYTAFQIIHRLWKSRAKKRILFLADRTA 228
           R YQQ AV+ T+          ++V+ TG GK+    ++        A+ R+L LA    
Sbjct: 6   RPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARL-----ARGRVLVLAHVRE 60

Query: 229 LIDQTRRGDFKHFKDKMTIIKKKVVSRADGKEELVSNNKRGIDTEDKAYEVFLGLYQGLT 288
           L++Q       H K     ++  + +              G++  D   +V  G  Q + 
Sbjct: 61  LVEQN------HAKYCALGLQADIFAA-------------GLNQHDSEGKVVFGSVQSVA 101

Query: 289 NASDIEDAYKDFSPEFFDLIVIDECHRGSAKEDSAWREILRYFNKATH----IGLTATPK 344
              D  D       + F L+++DECHR S  E+S +++I++   +A      +GLTATP 
Sbjct: 102 RHPDKFD-------DAFSLLIVDECHRISDDENSQYQQIIQQAQQANPQLRLLGLTATPY 154

Query: 345 ETKEVSNIEY-------------FGDPIYTYSLKQGIDDGFLAPYRVVRVNLNVDAEGWR 391
                   +Y             F D IY   L+  I  GFL P    R+++ V    + 
Sbjct: 155 RLGRGWIYQYHYHGMIRGDDGCLFRDCIYELPLRYMIRHGFLVPPE--RLDMPVVQYDFS 212

Query: 392 PEQGKKDK--DGKEVEDRVYNRKDF-----DKTLVIDER-TQTVARKLTEFLKGYDRFAK 443
               + D   +     + ++N   F     ++ L   +R T  + R++TE+         
Sbjct: 213 QLAARSDGLFNNGLFNNGLFNNGRFSDVELNRELKRQQRVTPHIVRQITEYAANR---RG 269

Query: 444 TIVFCSDIDHAERMRFALSNLNADLVAKNHKYIMQITGDNDEGKRELDNFINPEETYPVI 503
            ++F + ++HA  +   L    A L          I+G+    +R+       ++    +
Sbjct: 270 VMIFAATVEHAREVAGLLPASEAAL----------ISGETPAPQRDALIAAFKQQQLRYL 319

Query: 504 ATTSELMTTGVDAQTCRVIVLDAEIKSMTKFKQIVGRGTRINEEFGKMFFTILDFR-NVT 562
              S ++TTG DA    VI +    +S++ ++QI+GRG R+    GK    ILD+  N  
Sbjct: 320 VNVS-VLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLFP--GKSDCLILDYAGNPF 376

Query: 563 DLFADK------DFDGDPIRV 577
           DL+  +        D  P++V
Sbjct: 377 DLYTPEVGHSKPHSDSQPVQV 397