Pairwise Alignments

Query, 818 a.a., Type I site-specific restriction-modification system, R (restriction) subunit and related helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 759 a.a., DEAD/DEAH box helicase from Phocaeicola dorei CL03T12C01

 Score = 58.9 bits (141), Expect = 1e-12
 Identities = 93/391 (23%), Positives = 150/391 (38%), Gaps = 67/391 (17%)

Query: 169 RYYQQIAVNRTVEAVANGQGRILLVMATGTGKTYTAFQIIHRLWKSRAKKRILFLADRTA 228
           R YQ     R +EA       +++ M TGTGKT+    ++   + S A   +  +A R  
Sbjct: 3   RDYQIEMKTRLMEAW-KAHRSVMVQMPTGTGKTHLLASVVSE-FVSSAGSGVWLIAHRRE 60

Query: 229 LIDQTRRGDFKHFKDKMTIIKKKVVSRADGKEELVSNNKRGIDTEDKAYEVFL--GLYQG 286
           L+ Q                           EE ++  K GI  ED    V     L + 
Sbjct: 61  LVAQM--------------------------EETLA--KYGIRREDTPVRVMSVQWLSRH 92

Query: 287 LTNASDIEDAYKDFSPEFFDLIVIDECHRGSAKEDSAWREILRYFNKATHIGLTATPKET 346
              A D              LIVIDE H   A   +++ E+ + +  A  +G+TATP   
Sbjct: 93  WNEAGDAPG-----------LIVIDEAHHALA---ASYTEMWKRYPAAKKLGVTATPCRL 138

Query: 347 KEVSNIEYFGDPIYTYSLKQGIDDGFLAPYRVVRVNLNVDAEGWRPEQGKKDKDGKEVED 406
                 E F   + ++S+ + I+ G L+ +  V +    +      EQ   D   K   D
Sbjct: 139 NRRGFTELFEVLVTSWSIAEFIEKGVLSVFDYVSIRPGSE------EQRLIDGLEKRGAD 192

Query: 407 RVYNRKDFDKTLVIDERTQTVARKLTEFLKGYDRFAKTIVFCSDIDHAERMRFALSNLNA 466
             Y  K+ D  L      + + R + +F  G     K +V+   I+HA R+    S    
Sbjct: 193 GDYQVKEMDAVLNRRPGIERLYRSVRQFASG----KKGMVYAISIEHARRIAEYYSRWGV 248

Query: 467 DLVAKNHKYIMQITGDNDEGKRELDNFINPEETYPVIATTSELMTTGVDAQTCRVIVLDA 526
           + VA + K          E KR ++ F + +     +    ++ + G D      + L  
Sbjct: 249 NAVAVDSKTPAM------ERKRMVEEFRHGKIE---VLVNVDVFSEGFDCPDVEFVQLAR 299

Query: 527 EIKSMTKFKQIVGRGTRINEEFGKMFFTILD 557
              S+ K+ Q VGRG R +E  GK    ++D
Sbjct: 300 PTLSLAKYLQQVGRGLRRSE--GKEACMLID 328