Pairwise Alignments

Query, 415 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 648 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

 Score =  139 bits (349), Expect = 3e-37
 Identities = 115/409 (28%), Positives = 200/409 (48%), Gaps = 24/409 (5%)

Query: 9   ESFRFALQALRSNLTRTVLSLLGVTIGIFAIIAVFTLVDSLEKNIKSSFSFLGTNVLRVD 68
           E+ R A  A+ ++  R++L++LG+ IGI ++ A+  L    ++ I SS S LGTN + V 
Sbjct: 256 EALRMAGAAIWAHKMRSLLTMLGIIIGIASVAAISALGAGSQQQILSSISSLGTNTIEVR 315

Query: 69  RFPFSSGPGEYPWWRYFRRPPANYSEFVFLKERLKNAEAITISASASATLKRGSSSFEGA 128
                 G G+    +     PA+    V         +++T + + S T+KR + +   A
Sbjct: 316 A---GKGFGDLEAGKIRTLVPADAEALV----NQPYVDSVTPTVTTSVTVKRAAVAVN-A 367

Query: 129 NLEGVVFDHKEVYDVPVVDGRFFTELEITAARNVTVLGAKIANALFPEG-DAIGKEMKIK 187
           ++ GV  D   V  + +  G+ F   ++ A     V+ A  A  LFP+  + +G+ + + 
Sbjct: 368 SVTGVGADFFRVRGLELAHGQLFDAQDVIAYSQNVVIDASAARDLFPDRVNPVGQVILLG 427

Query: 188 GQKFMVIGLLEEEGEGLFDLPSKDDACLIPFGS-FGKMYYLGRWGIEPTIAAKGMDSDRG 246
                V+G+ + E    F           P+ +  G+M  LGR  ++        D D G
Sbjct: 428 TMPARVVGVTKRENS--FGPAVDTLTVYAPYTTVMGRM--LGRPNVDGITVRIRDDVDPG 483

Query: 247 LIALENEMTGLLRGKRGLKPTEEDDFALNKSEFIQNAIGAIFDVISIAGAVIGGFSILVG 306
            +  E  +T L+  + G K     DF L  S  I+  I      +++  + +   S++VG
Sbjct: 484 NV--EAAVTRLIERRHGAK-----DFFLTNSATIRETIETTTQTLTLLISSVAVISLIVG 536

Query: 307 GFGIANIMFVSVRERTNIIGIQKSLGAKNYFILLQFLFESTFLSLFGGLTGLVLVFAITF 366
           G G+ NIM VSV ERT  IG++ ++GA+   IL QFL E+  + L GGL G++L   I+ 
Sbjct: 537 GIGVMNIMLVSVTERTKEIGVRVAVGARRSDILSQFLIEAVMVCLVGGLMGIMLALGISA 596

Query: 367 ---IPLGSLEIFMSAKNMALGIGLSMVIGMLSGVVPAGIAARMDPVEAI 412
              +     ++  S  ++ +    S +IG++ G +PA  AA++DP+EA+
Sbjct: 597 LFNLLSPDFKMIFSPGSIIVAFACSTLIGIVFGFLPARNAAKLDPIEAL 645