Pairwise Alignments

Query, 252 a.a., ABC transporter ATP-binding protein from Caulobacter crescentus NA1000 Δfur

Subject, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

 Score =  263 bits (672), Expect = 2e-75
 Identities = 130/241 (53%), Positives = 179/241 (74%), Gaps = 5/241 (2%)

Query: 8   MDGLFVDSVGKSFGDRPVVKNVSLRLKRGEVAGLLGPNGAGKTTCFYMVTGLIAADYGAI 67
           M  L    + KS+  R VV++VSL +  G++ GLLGPNGAGKTTCFYM+ GL+ A+ G +
Sbjct: 1   MATLKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRV 60

Query: 68  YLDGENITAQPMFQRARLGVGYLPQEASIFRGMTVEQNVMAVVEMR---ERDPRKAREQV 124
            +D  +++ QPM  RAR G+GYLPQEASIFR ++V  N+MA++E R   +RD R  R+++
Sbjct: 61  LIDNLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGR--RKEL 118

Query: 125 TSILEELRITHIRKSPAVALSGGERRRVEIARALASEPSFMLLDEPFAGIDPLAIADIRE 184
            S+L+E  I+HIR +  ++LSGGERRRVEIARALA+ P F+LLDEPFAG+DP+++ DI++
Sbjct: 119 ESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQ 178

Query: 185 VIGYLKGRGIGILITDHNVRETLDIIDRASIIHAGEVLFEGSPREIVENPEVKRVYLGES 244
           +I +LK +GIG+LITDHNVRETLDI + A I++ G ++ EG    I+ N  VK VYLG  
Sbjct: 179 IIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYLGHE 238

Query: 245 F 245
           F
Sbjct: 239 F 239