Pairwise Alignments

Query, 433 a.a., membrane-bound lytic murein transglycosylase B from Caulobacter crescentus NA1000 Δfur

Subject, 421 a.a., lytic murein transglycosylase from Agrobacterium fabrum C58

 Score =  239 bits (609), Expect = 2e-67
 Identities = 156/404 (38%), Positives = 211/404 (52%), Gaps = 19/404 (4%)

Query: 40  TTVTPAPTPQTPVPAG-ELAFDTWMQ-DFRGRAIAAGLSPDLLDRELGG----------V 87
           TTV     P+    A  +  F+ W++ +    A  AG+S + L+  L G          V
Sbjct: 20  TTVLAQSAPKGAAAAKYDADFNAWLKKEIWPEARKAGISQETLEATLSGLSISWNLPDLV 79

Query: 88  IPDPRVISLDSR-QPEFSKPVGDYIRGVISEDRVAIGRS-KRDQLDFLSQIESRYGVPGD 145
           IP  +     S+ Q EFS P G Y      +     GRS        L +IE++YGVPGD
Sbjct: 80  IPGQKPPKEQSQSQAEFSSP-GAYFSEKRLQGLAVTGRSLAATHAATLRRIETKYGVPGD 138

Query: 146 ILLAVWAMESAFGQLQGNFDVVRSMVSLAADGRRRAWAEGELIAALKIIDSGEVTRAQLK 205
           I++A+W  ES FG+ +    VV  + + A    R+     ELI ALKI++SG++  +++ 
Sbjct: 139 IVVAIWGRESGFGRAKLPHSVVDVLATKAYMSTRKEMFRTELIDALKIVESGDIAASRMM 198

Query: 206 GSWAGAMGQTQFIPTSFRATAVDFDGDGRRDIWGSDADALASAANLLVRGGWKRNVGWAR 265
           GSWAGA+GQ QF+P+S+   AVDFDGDG RDIW S  DALAS AN L + GW+RN  W  
Sbjct: 199 GSWAGALGQPQFMPSSYLKYAVDFDGDGHRDIWNSVPDALASIANYLSQRGWQRNRDWGF 258

Query: 266 EVILPPGFDYSVTEGP--REIPAWWEARGVRRADGLPWTAQDAASPAMLILPAGATGPAF 323
           EV +P        EGP      A W   G+ R  G  +   D  +  M+++PAG  GP F
Sbjct: 259 EVSIPANVS-CAQEGPDLARPVADWAKMGITRISGKAFPVNDLTADGMMLVPAGRHGPEF 317

Query: 324 LALPNHFAIRTYNNSTSYALGIGLLADRFAGGAPPIT-PWPVETPLSMSDRMAAQIALAR 382
           +  PN + I+ YNNS  YAL IG LADR A GA P    W     +  SD +  Q AL  
Sbjct: 318 VVTPNFYVIKEYNNSDLYALFIGNLADRIAHGAGPFKGEWGNVGSMLRSDVLTMQKALVA 377

Query: 383 VGFNPGPADGVIGAGTRRALRAWQQSQQLPADGYLSNDMVARLK 426
            G++ G ADG+ G  TRR+L  WQ    L    +    + A+LK
Sbjct: 378 KGYDVGKADGLAGFKTRRSLGDWQSKNGLAPTCFPDATLKAKLK 421