Pairwise Alignments

Query, 640 a.a., excinuclease ABC subunit C from Caulobacter crescentus NA1000 Δfur

Subject, 642 a.a., excinuclease ABC chain C from Agrobacterium fabrum C58

 Score =  741 bits (1912), Expect = 0.0
 Identities = 374/646 (57%), Positives = 472/646 (73%), Gaps = 24/646 (3%)

Query: 9   DAEAPLRQAAPLWGAALIKDEVTRLPDAPGVYRMIGEADEVLYVGKAKSLKKRVVQYAQG 68
           D  A  +  + L G  LI + V  LP++PGVYRM  EA +VLYVGKA+SLKKRV  YAQG
Sbjct: 2   DWNAGWKNESGLKGMDLIGEFVKHLPNSPGVYRMFNEAGDVLYVGKARSLKKRVGNYAQG 61

Query: 69  RFHTNRIANMVDATRAMEFITTRTEADALLLEINLIKQLKPRFNVLLRDDKSFPEIVIRR 128
           R H+NRIA MV  T  MEF+TTRTE +ALLLE NLIK+L+PRFNVLLRDDKSFP I+I  
Sbjct: 62  RVHSNRIAQMVRFTTHMEFVTTRTETEALLLEANLIKRLRPRFNVLLRDDKSFPYILITA 121

Query: 129 DHDAPQLRKHRGAHTIKGDYFGPFASAWAVNRTLNTLQKAFLLRSCSDSVYDSRDRPCML 188
           D+ AP + KHRGA   KGDYFGPFASA AV RT+N+LQ+AFL+R+C+DSV+++R RPC+L
Sbjct: 122 DNRAPAIFKHRGARARKGDYFGPFASAGAVGRTINSLQRAFLIRTCTDSVFETRTRPCLL 181

Query: 189 YQIKRCAAPCTGLIGKDDYQALVDQAEAFLRGKSRAVMATMAKAMEEAAEELEFERAARL 248
           YQIKRC+ PCT  +  + Y  LV +A+ FL GKS+AV   +A+ M EA+E+L+FERAA  
Sbjct: 182 YQIKRCSGPCTHEVSDEGYAELVKEAKDFLSGKSQAVKTAIARQMNEASEDLDFERAAIY 241

Query: 249 RDRIRALSAVAQETQINPETVEEADVVALHVEGGQACVQVFFFRAGQNWGNRAYFPRITG 308
           RDR+ ALS V     INP  +EEADV A+H EGG +C+QVFFFR GQNWGNRAYFP+   
Sbjct: 242 RDRLAALSHVQSHQGINPAGIEEADVFAIHHEGGISCIQVFFFRTGQNWGNRAYFPKADP 301

Query: 309 AADDPEDETVTEEQRIITAFLGQFYDDKPIPRLILANVQPAESELLSEAFALKSGRKVEI 368
           +    E         I+ AFL QFYDDKP+P+ IL +    E ELL+ A   K+G KV I
Sbjct: 302 SLPGSE---------ILNAFLAQFYDDKPVPKQILLSETVEEQELLAAALGEKAGHKVTI 352

Query: 369 AVPKRGEKADLVQHVLTNAREALGRKMAEGSAQTKLLAGVAEAFKLDAPPERIEVYDNSH 428
           +VP+RGEK D+  HVL NAREA GRK+AE S+Q +LL G AE F L   P RIE+YDNSH
Sbjct: 353 SVPQRGEKKDITDHVLANAREAHGRKLAETSSQARLLKGFAETFNLPYVPRRIEIYDNSH 412

Query: 429 IQGANAVGGMIVAGPEGFMKGQYRKFNIKSTELTPGDDYGMMKEVLRRRFARLVKEEEEG 488
           I G NAVGGM+VAGPEGF+K QYRKFNIKST++TPGDD+GMM+EV+ RRF+RL+KEE + 
Sbjct: 413 IMGTNAVGGMVVAGPEGFVKNQYRKFNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKP 472

Query: 489 DDANR--------------PDLVLVDGGQGQLDAAIEIMADLGVDD-IAVVGVAKGPDRD 533
           D A                PD++L+DGGQGQ+ A   I+ +LG+ D +  +GVAKG DR+
Sbjct: 473 DRAQTPTPEEAADLPFPAWPDVILIDGGQGQMTAVRAILDELGIRDCVTAIGVAKGVDRE 532

Query: 534 AGLERFFIPGQTPFMLEPKSPVLYYLQRLRDEAHRFAIGAHRTRRSMDLKKNPLDEIEGV 593
           AG ERFF  G++ F L P+ PVLY++QR+RDEAHRFAIG+HR RR  ++ +NPLDEI G+
Sbjct: 533 AGRERFFADGRSDFSLPPRDPVLYFIQRMRDEAHRFAIGSHRARRKKEMVRNPLDEISGI 592

Query: 594 GPGRKKALLHAFGSAKGVGRASVEDLVKVDGVSQALAERIFGFFRK 639
           GPGRK++LL  FG+AK V RA + DL+ V G+S+ +A +I+  F +
Sbjct: 593 GPGRKRSLLQHFGTAKAVSRAGLNDLMTVTGISETVARQIYNHFHE 638