Pairwise Alignments

Query, 1032 a.a., cation/multidrug efflux pump acrB4 from Caulobacter crescentus NA1000 Δfur

Subject, 1021 a.a., ACR family transporter from Pseudomonas simiae WCS417

 Score =  741 bits (1912), Expect = 0.0
 Identities = 403/1014 (39%), Positives = 607/1014 (59%), Gaps = 9/1014 (0%)

Query: 2    NFNLSALAVRERSITLFLIIAMTFAGAFAFMKLGRAEDPSFSIKILTIVTAWPGATAQEM 61
            +FNLS  A++ +S   +L+      G F++M LGR EDPSF+IK + I T WPGAT +E 
Sbjct: 4    SFNLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEET 63

Query: 62   QDQVAEPLEKRMQELKWYDRSETFTRPGLAFTTLTLKDQIPAKELQEQFYQTRKKMADEA 121
              QV + +EK+++EL   D  +++TRPG +   + LKD   AK + E +YQ RKK+ D  
Sbjct: 64   LKQVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKAIPEIWYQVRKKIDDIR 123

Query: 122  PNLPRGVLGPFVNDEYGDVSFALYALKAKGEPQRLLVRQAETLRQRLLHVPGVKKVQIVG 181
               P+G+ GP  NDE+GDV  ++YA    G   R L    E +R  +  VPG+ KV+++G
Sbjct: 124  GTFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRSVPGLGKVEMIG 183

Query: 182  EQPQKIFVEFSQARLATLGVSPRDLFAALNDRNLITPAGAIETQGPQVQVRLDGAIDSLE 241
            +Q + I++ FS  +LA LG+  R +  +L  +N +TPAG IE    ++ VR  G   S +
Sbjct: 184  QQDEVIYLNFSTRKLAALGIDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEK 243

Query: 242  KIKETPIVVGGRTLKLGDIAEVKRGYEDPATFLIRNGGEPAIVLSVVMKDRFNGLELGKN 301
             +    + +  R  +L DIA++ RGY DPA  + R  G+PAI L++ M+   N    GK 
Sbjct: 244  DLANVNLRLNDRFYRLADIADISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFGKA 303

Query: 302  LEKEAKAISAEMPLGMSFSKITDQAVNIAEAYGEFMLKFFVALAVVIVVSLISLGFRVGV 361
            L +    ++A++P+G+   K++DQA  + EA G F    F A+ +V+VVS ISLG R G+
Sbjct: 304  LHERMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRAGL 363

Query: 362  VVAMAVPLTLAGVFVIMLVTGRDFDRITLGALILSLGLLVDDAIIIIETIVVKMEEGKDR 421
            VVA ++PL LA VFV M  +G    R++LGALI++LGLLVDDA+I +E ++ ++E+G+ +
Sbjct: 364  VVACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKGETK 423

Query: 422  ISAATYAWGHTAAPMLAGTLVTIIGLMPVGFAQSSAGEYAGNIFWVVAFALITSWFVAVI 481
              AATYA+  TA PML GTLVT+ G +P+G   SSAGEY   +F V+A A++ SW VAV+
Sbjct: 424  EQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVVAVL 483

Query: 482  FTPYLGV-LMIPKIKPIEGGHAAIYDTPRYRQLRSLVTWTVDNRFKVAAGVGVAM-VLAV 539
            F P +GV ++   +KP       I      R     + W + NR+  A G+ VA+ V +V
Sbjct: 484  FAPVIGVHILSANVKPHNAEPGRI-----GRAFNGGMLWAMRNRW-WAIGITVALFVASV 537

Query: 540  LMMGGIKQQFFPLSDRPEVLIEVQMPEGQSIGSTSEAVAKVEAWLAKQPEAEIYTSYIGQ 599
              M  ++ QFFP SDRPE+L+++ +P+  SI  T +AV ++EA +   P+   +++YIGQ
Sbjct: 538  FSMQFVQNQFFPSSDRPELLVDLNLPQNASINETRKAVDRLEAIIKDDPDIARWSTYIGQ 597

Query: 600  GAPRFFLAISPELPDPSFAKIVVLTPNEKARDALKNRFRQFAADGSVQGAKLRATQIVFG 659
            GA RF+L +  +L +P +A++V+++   + R  L  R ++   D  V G       +  G
Sbjct: 598  GAIRFYLPLDQQLENPYYAQLVIVSKGLEERGELIARLQKRLRDDFV-GIGSYVQPLEMG 656

Query: 660  PPSPFPVAFRVMGPNADRVREIAERVKGVMLANQGMRQVNTDWGERAPTVHFVLDQDRLR 719
            PP   P+ +RV G + D+VR+ A  +  ++  N  + ++  DW E    +   + QD+ R
Sbjct: 657  PPVGRPIQYRVSGKDTDQVRKHAIELATLLDKNSHLGEIIYDWNEPGKVLRIDIAQDKAR 716

Query: 720  AFGLSSTDAAQQLQFLLTGVPVTQVREDIRTVDVLARTSGQDRLDPARLGAFTLVGAAGQ 779
              GLSS D AQ +  +++G  VTQV +DI  ++V+ R    +R  P  L    +V   G 
Sbjct: 717  QLGLSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTPNGT 776

Query: 780  RIPLDQIGKAEIRMEDPILRRRDRMTTITVRGDIDERLQPPDVSTKVQKELQPIIKTLPA 839
             IPL         +E P++ RRDR  TIT++  + + +QP D+  +++ E+      LP 
Sbjct: 777  SIPLLAFATVRYELEQPLVWRRDRNPTITIKASVRDEMQPTDLVKQLKPEIDKFSAGLPV 836

Query: 840  GYRIEMGGSIEEAGKANKALAVVFPLMFILMMVVIIFQVRSLSAMWMVLLTAPLALVGVA 899
            GY++  GG++EE+GKA   +A V PLM  LM   ++ Q+ S+  M++V   APL L+GV 
Sbjct: 837  GYKVATGGTVEESGKAQGPIAKVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLIGVV 896

Query: 900  PTLLIFHQPFGFNAILGLIALAGIIMRNSLILIGQIQINQEEGLDPFHAVVEATVQRARP 959
              L+    P GF AILG++AL GII+RNS+IL+ QI   +  G  P+ AVVEAT  R RP
Sbjct: 897  LALIPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHRRRP 956

Query: 960  VILTALAAVFAFIPLTLSVFWSSMAYTLIGGTIGGTILTLVFLPALYAMWFKIK 1013
            ++LTA AA    IP+   VFW  MAY +IGG I  T+LTL+FLPALY  W+KI+
Sbjct: 957  ILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIR 1010