Pairwise Alignments

Query, 221 a.a., GntR-family transcriptional regulator from Caulobacter crescentus NA1000 Δfur

Subject, 228 a.a., transcriptional repressor for rspAB from Escherichia coli BL21

 Score = 66.6 bits (161), Expect = 4e-16
 Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 11/201 (5%)

Query: 16  LRDQIVQGLLRPGTLLRQEAVAAELGVSRIPVFHALAKLESEGLIEISPNRAAFVSTPSV 75
           LR  IV  L+ PGT L ++ V+    VSR PV  A  KL   GLI+I P R ++V+  S+
Sbjct: 21  LRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISM 80

Query: 76  ARCLEIFDLRRLLE-------SDMLARSIGQHTPKTLRAVRAVMLELEDDEGPRAWIAAD 128
           A+      +R+ +E       + M+  S      + L   R  +   + D+    +   D
Sbjct: 81  AQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDD----FFELD 136

Query: 129 RRYYAALYAPADRDLTLMTVQNLRNAVDRIYLASELPVLEREAWLGRYQGLFDAVAAGDL 188
             ++  L   AD  L   T++NL+  VDR+   S   V   E  L ++  +F A+   D 
Sbjct: 137 DNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDG 196

Query: 189 ERSALLLGQNIQAMQSLVASL 209
           +     + Q++Q +   V  +
Sbjct: 197 DAVERAMTQHLQEISESVRQI 217



 Score = 23.1 bits (48), Expect = 0.005
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 79  LEIFDLRRLLESDMLARSIGQHTPKTLRAVRAVMLELED 117
           L+IF   +  + D + R++ QH  +   +VR +  E  D
Sbjct: 185 LDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSD 223