Pairwise Alignments

Query, 353 a.a., quinol cytochrome oxidase polypeptide II from Caulobacter crescentus NA1000 Δfur

Subject, 313 a.a., ubiquinol oxidase subunit II from Pseudomonas simiae WCS417

 Score =  315 bits (807), Expect = 1e-90
 Identities = 154/301 (51%), Positives = 205/301 (68%), Gaps = 10/301 (3%)

Query: 12  RALKSLLLAPAVLALGGCDWVVMNPSGDIAAQQRDLIILATVLMLLIIVPVIALTLFFAW 71
           R L  L L   +L LGGC W +M+P G I   QR+LII AT+LMLL++VPVI +T  FAW
Sbjct: 8   RLLGFLPLLGMMLMLGGCKWTLMDPKGQIGLDQRNLIITATLLMLLVVVPVIIMTFAFAW 67

Query: 72  KYRASNEEATYAPDWHHSTRLEIIIWAAPLIIITILGAVTWSSTHLLDPYRPLDRIAPGR 131
           KYRASN  ATYAP W HST++EI +W  P++II  LG +T+ STH LDPYRPL+      
Sbjct: 68  KYRASNTNATYAPKWSHSTKIEIAVWLVPILIIIALGYITYKSTHELDPYRPLE------ 121

Query: 132 SAENIKPLKVQVVALDWKWLFIYPELGIATVNEMAAPVDRPLNFELTSSSVMNSFYVPAL 191
              ++KP+ ++VVALDWKWLFIYP+LGIATVNE+  P + PLNF +TS +VMNSF++PAL
Sbjct: 122 --SDVKPINIEVVALDWKWLFIYPDLGIATVNEIQFPENTPLNFRITSDAVMNSFFIPAL 179

Query: 192 AGQIYAMPGMKTKLHAVINKPGQFEGFSANYSGDGFSHMRFKFHGMSEADFKRWVDGVRA 251
            GQIYAM GM+T+LH + N+  + EG SANYSG GF+ M+FK    S+  F  WV  V+A
Sbjct: 180 GGQIYAMAGMQTRLHLIANEKAEMEGISANYSGAGFTGMKFKAISTSQEGFNAWVAEVKA 239

Query: 252 GSGRLDRSRYLDLERPSEKQPVLRFASVDSGLFGAAVDRC--VEPGKMCHHDMAAIDARG 309
              +LD++ Y  L +PS+  PV  +++ +  LF   VD+   ++PGK   H+   + A  
Sbjct: 240 APKQLDQAEYDALTKPSQNNPVALYSAYEPNLFQKIVDKYEGMKPGKPVKHEKKEVAAVE 299

Query: 310 G 310
           G
Sbjct: 300 G 300