Pairwise Alignments

Query, 353 a.a., quinol cytochrome oxidase polypeptide II from Caulobacter crescentus NA1000 Δfur

Subject, 313 a.a., cytochrome bo terminal oxidase subunit II from Pseudomonas putida KT2440

 Score =  304 bits (778), Expect = 2e-87
 Identities = 139/268 (51%), Positives = 190/268 (70%), Gaps = 8/268 (2%)

Query: 23  VLALGGCDWVVMNPSGDIAAQQRDLIILATVLMLLIIVPVIALTLFFAWKYRASNEEATY 82
           +L L GC+W +++P G +  +Q++LI++AT LMLL+++PVI +TL FAWKYRASN+ ATY
Sbjct: 18  MLLLSGCNWTLLDPKGQVGIEQKNLILIATGLMLLVVIPVIIMTLAFAWKYRASNKAATY 77

Query: 83  APDWHHSTRLEIIIWAAPLIIITILGAVTWSSTHLLDPYRPLDRIAPGRSAENIKPLKVQ 142
            PDW HST++E  +W  P++II  LG VT+ STH LDPYRPLD         ++KP+++ 
Sbjct: 78  TPDWSHSTKIEAAVWIIPILIIIALGYVTYHSTHKLDPYRPLD--------SDVKPIQID 129

Query: 143 VVALDWKWLFIYPELGIATVNEMAAPVDRPLNFELTSSSVMNSFYVPALAGQIYAMPGMK 202
           VVALDWKWLFIYPE GIATVN++  P + P+NF +TS +VMNSF++P L GQIYAM GM 
Sbjct: 130 VVALDWKWLFIYPEQGIATVNKIVFPANTPVNFRVTSDAVMNSFFIPGLGGQIYAMAGMT 189

Query: 203 TKLHAVINKPGQFEGFSANYSGDGFSHMRFKFHGMSEADFKRWVDGVRAGSGRLDRSRYL 262
           TKLH + N+ G+F+G SANYSG GF+ M+FK    S+ DF +WV  V+    +LD++ Y 
Sbjct: 190 TKLHLIANENGEFDGISANYSGAGFTGMKFKATATSQEDFDKWVAEVKQSPKKLDKAEYD 249

Query: 263 DLERPSEKQPVLRFASVDSGLFGAAVDR 290
            L +PSE  PV  ++      F   VD+
Sbjct: 250 ALAKPSENNPVALYSEASPEQFQLIVDK 277