Pairwise Alignments

Query, 353 a.a., quinol cytochrome oxidase polypeptide II from Caulobacter crescentus NA1000 Δfur

Subject, 315 a.a., Cytochrome bo(3) ubiquinol oxidase subunit 2 from Pseudomonas sp. RS175

 Score =  301 bits (772), Expect = 1e-86
 Identities = 140/290 (48%), Positives = 198/290 (68%), Gaps = 10/290 (3%)

Query: 14  LKSLLLAPAVLALGGCDWVVMNPSGDIAAQQRDLIILATVLMLLIIVPVIALTLFFAWKY 73
           L  LL     L LGGC+  +++P G +   +R+LII AT+LMLL++VPVI +T  FAWKY
Sbjct: 9   LLGLLPLLGTLLLGGCNMTLLDPKGQVGLDERNLIITATLLMLLVVVPVIVMTFLFAWKY 68

Query: 74  RASNEEATYAPDWHHSTRLEIIIWAAPLIIITILGAVTWSSTHLLDPYRPLDRIAPGRSA 133
           RASN +A Y P W HST++E+ +W  P++II  LG +T+ STH LDPYRPLD        
Sbjct: 69  RASNTKAVYTPKWSHSTKIEVAVWTIPVLIIIALGYITYKSTHALDPYRPLD-------- 120

Query: 134 ENIKPLKVQVVALDWKWLFIYPELGIATVNEMAAPVDRPLNFELTSSSVMNSFYVPALAG 193
            ++KP+ ++VV++DWKWLFIYPE GIATVN++  P   P+NF++TS +VMNSF++P L G
Sbjct: 121 SDVKPVTIEVVSMDWKWLFIYPEQGIATVNKIVFPAHTPINFKVTSDTVMNSFFIPGLGG 180

Query: 194 QIYAMPGMKTKLHAVINKPGQFEGFSANYSGDGFSHMRFKFHGMSEADFKRWVDGVRAGS 253
           QIYAM GM+TKLH + N+  + EG SANYSG GF+ M+FK    ++ +F  WV+ V+   
Sbjct: 181 QIYAMAGMQTKLHLIANQNTELEGISANYSGAGFTGMKFKAIATTQEEFDAWVNDVKKAP 240

Query: 254 GRLDRSRYLDLERPSEKQPVLRFASVDSGLFGAAVDRC--VEPGKMCHHD 301
            +L+++ Y  L +PS+  PV  ++SV   LF   +D+   + PGK  HH+
Sbjct: 241 KQLEKAEYEALSKPSQNNPVELYSSVTPNLFQTIIDKYEGMNPGKPMHHE 290