Pairwise Alignments

Query, 353 a.a., quinol cytochrome oxidase polypeptide II from Caulobacter crescentus NA1000 Δfur

Subject, 315 a.a., cytochrome o ubiquinol oxidase subunit II from Escherichia coli BL21

 Score =  260 bits (664), Expect = 4e-74
 Identities = 124/288 (43%), Positives = 189/288 (65%), Gaps = 10/288 (3%)

Query: 11  SRALKSLLLAPAVLALGGCDWVVMNPSGDIAAQQRDLIILATVLMLLIIVPVIALTLFFA 70
           +++L  L L    + L GC+  +++P G I  +QR LI+ A  LML++++P I + + FA
Sbjct: 7   NKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFA 66

Query: 71  WKYRASNEEATYAPDWHHSTRLEIIIWAAPLIIITILGAVTWSSTHLLDPYRPLDRIAPG 130
           WKYRASN++A Y+P+W HS ++E ++W  P++II  L  +TW +TH L+P +PL      
Sbjct: 67  WKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL------ 120

Query: 131 RSAENIKPLKVQVVALDWKWLFIYPELGIATVNEMAAPVDRPLNFELTSSSVMNSFYVPA 190
             A + KP+ ++VV++DWKW FIYPE GIATVNE+A P + P+ F++TS+SVMNSF++P 
Sbjct: 121 --AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPR 178

Query: 191 LAGQIYAMPGMKTKLHAVINKPGQFEGFSANYSGDGFSHMRFKFHGMSE-ADFKRWVDGV 249
           L  QIYAM GM+T+LH + N+PG ++G SA+YSG GFS M+FK     + A+F +WV   
Sbjct: 179 LGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAEFDQWVAKA 238

Query: 250 RAGSGRL-DRSRYLDLERPSEKQPVLRFASVDSGLFGAAVDRCVEPGK 296
           +     + D + +  L  PSE   V  F++V   LF   +++ +  GK
Sbjct: 239 KQSPNSMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGK 286