Pairwise Alignments

Query, 246 a.a., integral membrane protein from Caulobacter crescentus NA1000 Δfur

Subject, 250 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 69.7 bits (169), Expect = 5e-17
 Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 41/261 (15%)

Query: 6   IAQLGAFQGPLTALLQVLMIDLVLAGDNAVAVGLAAGGLPAKERKKVILYGLGAAVLLRI 65
           + QL A      AL  ++++++VL  DN + + +    LP + R K    G+  A++LR+
Sbjct: 4   LLQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRL 63

Query: 66  ----TFALI---TTWLLGVVG--------LLLAGGFLLLWVCWKMWRELREQTTHDEADA 110
               T A I   T  +  V G        +L+AGG  L+W   K   E+           
Sbjct: 64  GLLSTIAFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVW---KATTEIHHS-------- 112

Query: 111 MAMIDDDPSTEPRARPNKT---FKAAFLQVLIADVSMSLDNVLAVAGAAREHPGILIFGL 167
              +D +P  +  +  N     F AA  Q+L+ D+  S+D+++   G   EH  I+I  +
Sbjct: 113 ---MDPEPEEKETSAGNVVAIGFAAAIGQILLLDLVFSIDSIITAVGMT-EHLPIMIIAV 168

Query: 168 LLSIVLMGVAATAIANLLHKHRWIGFVGLAIVLYVAAHMIWTGHRSVVMD--LNHTPAYN 225
           + S+++M VAA  +A  ++ +  +  + L  ++ +   +I  G  + V    +    A++
Sbjct: 169 VTSVIVMLVAAEPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFS 228

Query: 226 AAVPDLIDITPDEVAQHNKHR 246
           AA+  L       +A+ N+H+
Sbjct: 229 AAIECL------NIARRNRHK 243