Pairwise Alignments

Query, 356 a.a., RecA protein from Caulobacter crescentus NA1000 Δfur

Subject, 348 a.a., Recombinase A from Alteromonas macleodii MIT1002

 Score =  463 bits (1192), Expect = e-135
 Identities = 235/342 (68%), Positives = 282/342 (82%), Gaps = 7/342 (2%)

Query: 14  EGDKQRALEAALAQIDRAFGKGSVMKLGEKGKVEIESVSTGSLGLDIALGIGGLPKGRIV 73
           + +K +AL AA+ QI++ FGKG++M+LG+   ++IE++STGSL +DIALGIGGLP GR+V
Sbjct: 2   DDNKSKALTAAVGQIEKQFGKGAIMRLGDNQAMDIEAISTGSLTIDIALGIGGLPCGRVV 61

Query: 74  EVYGPESSGKTTLALHVVAEVQKAGGTAAFVDAEHALDPSYAYKLGVNLDNLLVSQPDNG 133
           E+YGPESSGKTTL L V+AE Q+ G T AFVDAEHALDP YA KLGVN+D LLVSQPD G
Sbjct: 62  EIYGPESSGKTTLTLQVIAEAQRKGKTCAFVDAEHALDPVYAEKLGVNIDELLVSQPDTG 121

Query: 134 EQALEITDTLVRSGAVDIVVVDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTASI 193
           EQALEI D LVRSGAVD+V+VDSVAALTPKAEIEG+MGDS  GLQARLMSQALRKLTA+I
Sbjct: 122 EQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANI 181

Query: 194 NKANTIVIFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGSVKARDEIVGNNV 253
            ++NT+ IFINQIR KIGVM+G+PETTTGGNALKFY+SVRLDIRR G+VK  DE+VGN  
Sbjct: 182 KRSNTLCIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAVKEGDEVVGNET 241

Query: 254 RVKVVKNKVAPPFREVEFDIMYGEGISKLGEVIDLGVKAGIIDKAGSWFSYGSQRIGQGR 313
           RVKVVKNKVAPPF++ EF I YGEGISK  E+IDLGVK  ++DKAG+W+SY   RIGQG+
Sbjct: 242 RVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYKGDRIGQGK 301

Query: 314 DNVREFLKNNPDVAADIEKAVRKSSQKIEEELLVGGPEEGEE 355
            NV +FLK NP++A +IE        KI +ELL+    + EE
Sbjct: 302 ANVMKFLKENPEIANEIE-------TKIRQELLLSKTMKAEE 336