Pairwise Alignments

Query, 550 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000 Δfur

Subject, 500 a.a., glycine/betaine ABC transporter from Pseudomonas simiae WCS417

 Score =  216 bits (550), Expect = 2e-60
 Identities = 124/329 (37%), Positives = 184/329 (55%), Gaps = 20/329 (6%)

Query: 18  VGASSLGTVFEWYDFYLYGSLAPIITSHFFSGVNETTGFILALLAFAAGFAIRPLGALIF 77
           + A++LG   EW+DF +YG +A ++   FF   + +   I AL  F+  F IRPLG L F
Sbjct: 28  ITAAALGNAMEWFDFGVYGFVAYVLGKVFFPDASPSVQMIAALGTFSVPFLIRPLGGLFF 87

Query: 78  GRLGDLWGRKNTFLITMLLMGVSTFVVGLLPSYAQIGVAAPIALVLMRLVQGLALGGEYG 137
           G LGD +GR+     T+++M +STF +GL+PSYA IG+ API L+L ++ QG ++GGEY 
Sbjct: 88  GALGDKYGRQKVLAATIVIMSLSTFAIGLIPSYASIGIWAPILLLLCKMAQGFSVGGEYT 147

Query: 138 GAATYVAEHAPPGKRGFYTSWIQTTATIGLFLSLAVILVARIQLGEEAFKAWGWRIPFLV 197
           GA+ +VAE+AP  KRGF  SW+   +  G  L   V+++    LGE  F++WGWR+PF +
Sbjct: 148 GASIFVAEYAPDRKRGFLGSWLDFGSIAGFVLGAGVVVLISSILGEADFESWGWRLPFFL 207

Query: 198 SLLLLGVSLWIRLKLHESPTFER-MIAEGKGSKKPLTE---------AFGNWPNLKIVLL 247
           +L L  + L++R  L E+P F++ M    +G ++ LT          A  +W +    LL
Sbjct: 208 ALPLGIIGLYLRHALEETPAFQQHMDKMEQGDREGLTHGPKVSFKEVATKHWRS----LL 263

Query: 248 ALVGLTMGQAVVWYTGQFYALFFLEKTL---KLDGALANTLVAVALLIGTPFFVICGWLS 304
             +G+     V +Y    Y   +L   L   +  G L    + V +L   PF    G++S
Sbjct: 264 TCIGIVAATNVTYYMLLTYMPSYLSHNLHYKENSGVLIIIAIMVGMLFVQPFI---GFIS 320

Query: 305 DKIGRKPIIILGCLLAALTYFPIFKAITT 333
           DKIGRKP II G +       P F  IT+
Sbjct: 321 DKIGRKPFIIAGSIGLLFLSIPAFMLITS 349



 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 3/93 (3%)

Query: 456 GLLALLVIYVTMVYGPIAAMLVELFPTRIRYTAMSLPYHIGNGWFGGFLPTTAFAIVAAT 515
           GLL L VI +    G +A+ L  +FPT +RY+A++  +++ +    G  PT    +V +T
Sbjct: 358 GLLILAVI-LNFFIGVMASTLPAMFPTHLRYSALASAFNV-SVLIAGLTPTAVAWLVEST 415

Query: 516 GDIYSGLWYPVIIAAITAVVGGLFLKDTRHNRL 548
            D+Y   +Y +++ A+  ++ GL +K+T +  L
Sbjct: 416 NDLYMPAYY-LMVFAVVGLITGLTMKETANKPL 447