Pairwise Alignments

Query, 550 a.a., transporter, major facilitator superfamily from Caulobacter crescentus NA1000 Δfur

Subject, 500 a.a., Proline/betaine transporter from Pseudomonas sp. DMC3

 Score =  215 bits (547), Expect = 4e-60
 Identities = 120/325 (36%), Positives = 186/325 (57%), Gaps = 12/325 (3%)

Query: 18  VGASSLGTVFEWYDFYLYGSLAPIITSHFFSGVNETTGFILALLAFAAGFAIRPLGALIF 77
           + A++LG   EW+DF +YG +A ++   FF G +     I AL  F+  F IRPLG L F
Sbjct: 28  ITAAALGNAMEWFDFGVYGFVAYVLGKVFFPGADPGVQMIAALATFSVPFLIRPLGGLFF 87

Query: 78  GRLGDLWGRKNTFLITMLLMGVSTFVVGLLPSYAQIGVAAPIALVLMRLVQGLALGGEYG 137
           G LGD +GR+     T+++M +STF +GL+PSYA IG+ API L+L ++ QG ++GGEY 
Sbjct: 88  GALGDKYGRQKVLAATIVIMSLSTFAIGLIPSYASIGIWAPILLLLAKMAQGFSVGGEYT 147

Query: 138 GAATYVAEHAPPGKRGFYTSWIQTTATIGLFLSLAVILVARIQLGEEAFKAWGWRIPFLV 197
           GA+ +VAE+AP  KRGF  SW+   +  G      V+++    LGE+ F+ WGWRIPF +
Sbjct: 148 GASIFVAEYAPDRKRGFLGSWLDFGSIAGFVFGAGVVVLISTILGEQRFEEWGWRIPFFL 207

Query: 198 SLLLLGVSLWIRLKLHESPTFERMIAE-GKGSKKPLTEAFGNWPNLKIV-------LLAL 249
           +L L  + L++R  L E+P F++ + +  +G ++ L  A G   + K V       L+  
Sbjct: 208 ALPLGMIGLYLRHALEETPAFQQHVEKLEQGDREGL--AGGPKVSFKEVATKHWRSLMTC 265

Query: 250 VGLTMGQAVVWYTGQFYALFFLEKTLKLDGALANTLVAVALLIGTPFF-VICGWLSDKIG 308
           +G+     V +Y    Y   +L   L         L+ +A+++G  F   + G++SDKIG
Sbjct: 266 IGVVAATNVTYYMLLTYMPSYLTHNLHY-SENHGVLIIIAIMVGMLFVQPLIGFISDKIG 324

Query: 309 RKPIIILGCLLAALTYFPIFKAITT 333
           RKP I++G +   +   P F  I +
Sbjct: 325 RKPFIVVGSIGLFIFAIPAFMLINS 349



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 458 LALLVIYVTMVYGPIAAMLVELFPTRIRYTAMSLPYHIGNGWFGGFLPTTAFAIVAATGD 517
           L +L + +    G +A+ L  +FPT IRY+A++  +++ +    G  PT    +V +T D
Sbjct: 359 LLILAVLLNFFIGVMASTLPAMFPTHIRYSALASAFNV-SVLIAGLTPTAVAWLVESTND 417

Query: 518 IYSGLWYPVIIAAITAVVGGLFLKDTRHNRL 548
           +Y   +Y ++I A+  +V G+ +K+T +  L
Sbjct: 418 LYMPAYYLMVI-AVVGLVTGVTMKETANKPL 447