Pairwise Alignments

Query, 213 a.a., LexA-related transcriptional repressor from Caulobacter crescentus NA1000 Δfur

Subject, 216 a.a., bacteriophage repressor protein C1 from Agrobacterium fabrum C58

 Score =  200 bits (509), Expect = 1e-56
 Identities = 108/216 (50%), Positives = 142/216 (65%), Gaps = 7/216 (3%)

Query: 4   LSHGEIWRAIDALAERFDMTPSAMARMAGLDPTSFNRSKRGSAETGHARWPSTESLSKLL 63
           LSH  IW AID LAER  +TPSA+A+ AGLDPTSFN+SKR   + G  RWPSTES+SK+L
Sbjct: 2   LSHETIWSAIDTLAERHQLTPSALAKRAGLDPTSFNKSKRFGPD-GRKRWPSTESVSKVL 60

Query: 64  EATGVNFSEFA--ALTERSPVRAPGRRGA-PLIDLAQAGKDGFFDEAGMPVGAGWD--EA 118
           EATG +  +F   A      ++  G   A PL+  AQAG  GFFD+ G P G GWD  E 
Sbjct: 61  EATGASVDQFFGYAFGRAQTMQPSGADNAIPLLGFAQAGSGGFFDDGGFPAGQGWDVVEF 120

Query: 119 PA-PDLGEGLFALEVTGDDLAPVYRDGDRLLVSPTLEPRKGDRVVTRTHGGEVLVRELGR 177
           P+ P+  +G++ALEV G+ + P+YRDGD L+V P    R+GDRVV ++  GEV+ + L R
Sbjct: 121 PSSPERKQGVYALEVQGESMMPLYRDGDILIVEPGAPVRRGDRVVLKSRDGEVMAKVLAR 180

Query: 178 VTARSIELLALDRVSGERLLSRDEVAWIARIVWVSQ 213
            + ++IELL+L+     R     +V WIARI+W SQ
Sbjct: 181 QSPKNIELLSLNPEHPNRSFDMADVEWIARIIWASQ 216