Pairwise Alignments

Query, 597 a.a., acyl-CoA dehydrogenase from Caulobacter crescentus NA1000 Δfur

Subject, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

 Score =  610 bits (1574), Expect = e-179
 Identities = 309/596 (51%), Positives = 395/596 (66%), Gaps = 4/596 (0%)

Query: 3   YQPPVRDHAFILRDVLNIDQHGDLPGFSDAPFDVVEQILEAAAQFTGEVLAPLNTVGDKT 62
           Y PP+RD  F+L ++   ++   L G  +   D+++ +LE A +F  EVLAPLN  GD  
Sbjct: 4   YTPPLRDMRFVLHELHGSEELSKLKGLEELSPDLIDAVLEEAGKFVTEVLAPLNQSGDLE 63

Query: 63  GCKLDPVTNTVTTPPGFKDAYKQMCEGGWTAIGSDPAYGGQGLPHVVNLAFSEMSSSANM 122
           GC  +     V TP GFK+AY    EGGW  I  DP YGGQGLP  VN    EM  S N+
Sbjct: 64  GCTYE--NGVVRTPKGFKEAYTAFREGGWNGIACDPKYGGQGLPASVNKLVEEMLCSGNL 121

Query: 123 AFSMYPGLAHGAYSAIHVGGSDEQKQTFLPKMVSGEWTGTMNLTEPHCGTDLGLLRTKAV 182
           AF + PGL HGAY A+    S+E K+ FLPKMV G W+G+M LTEP CGTDLGL+RTKA 
Sbjct: 122 AFGICPGLTHGAYQALKAYASEELKERFLPKMVDGVWSGSMCLTEPQCGTDLGLVRTKAE 181

Query: 183 PQADGSYKITGQKIWISAGEHDMADNIVHLVLARIEGAPAGVKGISLFIVPKFIPNADGS 242
           P+ADGSYKITG KI+ISAGE DM +NIVHLVLAR+  AP G+KGISLF+VPKF+P  DGS
Sbjct: 182 PKADGSYKITGNKIFISAGEQDMTENIVHLVLARLPDAPKGIKGISLFLVPKFLPKEDGS 241

Query: 243 VGPRNEGAKCVGLEEKMGIHGNATCVMQYDEAVGYLIGEENSGLKIMFVMMNEARLGVGM 302
           VGPRN G  C G+E KMGIHG++TC M +DEA G+L+GE + G++ MF MMN  RL VG 
Sbjct: 242 VGPRN-GVLCTGIEHKMGIHGSSTCQMSFDEATGWLVGEPHKGMRAMFAMMNSERLSVGT 300

Query: 303 QGVAQGEAAYQAAVAFAKDRLQGRSLTGPKNAEGPADPIIVHPDVRRMLLESKALIEGGR 362
           QG+  GEAAYQAAV +AK+RLQGR+L+G K+ + PADPIIVHPDVRR L+  +A  EG R
Sbjct: 301 QGLGLGEAAYQAAVVYAKERLQGRALSGAKHPDKPADPIIVHPDVRRTLMTMRAYNEGCR 360

Query: 363 AFLFWTALHGDLSHVHPDPAVREKSSDYMGLMTPVLKGYLTDKGFQVCSNAVQVHGGSGF 422
           A   W A   DL     DP   +++ D+  LMTP++K   TD GF+  S  +QV+GG G+
Sbjct: 361 ALAGWVARALDLMERAEDPEESKRAEDFTALMTPIVKALFTDLGFEATSMGMQVYGGHGY 420

Query: 423 TEHFPVSQFMRDCRIALIYEGTNGVQALDLVGRKLAAKGGRAVMTFFQEIDQFIGENDSD 482
                + Q++RD RIA+IYEGTNGVQALDLVGRKL A  GR + +FF  +  ++     D
Sbjct: 421 IRDHGMEQYVRDARIAMIYEGTNGVQALDLVGRKLPAHMGRYLRSFFHPVLNYMDAKLDD 480

Query: 483 EALKPFIEALGGVKAQLQDGTMWLMQNGLQNPDNAGAASTDYMHLFGLAGLAYMWALMAK 542
           E L P I  L      LQ  T  + + GL++P+ AGAA+T+Y+ LFGL  L YMW  MA+
Sbjct: 481 ENLGPLITPLSKAFGALQLATAHIAEKGLKDPEEAGAAATEYLRLFGLVALGYMWVRMAE 540

Query: 543 AANAKIAAGSSD-PFFTTKLTTGRYFIERILPDAASHLAKLKTGSATLMALPAEAF 597
            A  K  +   D  F+  K+ T R+F+E++LPD A+    +K G  ++MAL    F
Sbjct: 541 VAFEKRVSNPDDAAFYDAKIVTARFFMEKLLPDVAALWGSIKAGKGSMMALDEAMF 596