Pairwise Alignments

Query, 373 a.a., DNA replication/repair protein RecF from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 357 a.a., recombination protein F (NCBI) from Escherichia coli BW25113

 Score = 68.2 bits (165), Expect = 3e-16
 Identities = 92/348 (26%), Positives = 140/348 (40%), Gaps = 23/348 (6%)

Query: 2   ITSLTLTDFRSYAGARLEMTSGPVVLHGPNGAGKTNLLEAISLLTPGKGLRGATAAEMGR 61
           +T L + DFR+   A L ++ G   L G NG+GKT++LEAI  L  G+  R      + R
Sbjct: 3   LTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRVIR 62

Query: 62  REPGQATGRAWAVMVELDDETRLGTGVQAAGAARRIVRIDGETAQPGRLLDYLRPV-WAT 120
            E  Q        +   + ET +G      G ++  VRIDG        L +L P+   T
Sbjct: 63  HE--QEAFVLHGRLQGEERETAIGLTKDKQGDSK--VRIDGTDGHKVAELAHLMPMQLIT 118

Query: 121 PEQDRLFSDARAERLKFFDRLVFAADPDHAASVSAYEKALRERLRLLNDAQDGREADPVW 180
           PE   L +     R  F D   F  +P    + S  ++ L++R   L       +  P W
Sbjct: 119 PEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRP-W 177

Query: 181 LDALEARLGEAGARAALARVAALHALQAAIDARSDRPFPQADLGLDGAAEQMAEAGAEED 240
               +  L     + +  R      + A +     +  P+  L              +E 
Sbjct: 178 ----DKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF-----SFQRGWEKET 228

Query: 241 EIAAAIREGLAKARARDGAAGRSLFGPHRTDLTALHREKQRPAAEG-SSGEQKALVLNLI 299
           E A    E L +   RD     +  GPH+ DL    R    P  +  S G+ K L+  L 
Sbjct: 229 EYA----EVLERNFERDRQLTYTAHGPHKADLRI--RADGAPVEDTLSRGQLKLLMCALR 282

Query: 300 LAQIARLSDHAARPIL-LLDEAPAHLDEARRTALFDEITALDLQAFMT 346
           LAQ   L+  + R  L L+D+  + LD+ RR  L   + A   Q F++
Sbjct: 283 LAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVS 330