Pairwise Alignments

Query, 970 a.a., DNA polymerase I from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

 Score =  707 bits (1826), Expect = 0.0
 Identities = 421/963 (43%), Positives = 573/963 (59%), Gaps = 70/963 (7%)

Query: 25  LWMIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGADGPTHLVAI-F 83
           L ++D S+Y++RA+HALPPLT  S G+P GAV+G  NML  L K       P  L A+ F
Sbjct: 6   LVLVDGSSYLYRAFHALPPLTT-SKGMPTGAVKGVLNMLKSLRKQY-----PDSLFAVVF 59

Query: 84  DNSEKTFRNTLYDQYKAHRPPPPEDLVPQFPLVREATAAFGVHCVELPGYEADDLIATYA 143
           D    TFR+ ++ +YKA+RP  P+DL  Q   +  +  A G   + + G EADD+I T A
Sbjct: 60  DAKGGTFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLA 119

Query: 144 CKARDAGGEAVIVSSDKDLMQLIGGGVVMWDPMKDRRLAEPEVFEKFGVGPEKMVDLQAL 203
             +   G   +I + DKD+ QL+ G + + + M    L    V EKFGVGPE ++D  AL
Sbjct: 120 RSSAALGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLAL 179

Query: 204 IGDSVDNVPGAPGIGPKTAAQLL--------DEYGDLDTL--LANAGEIKQPKRRQTLID 253
           +GD VDN+PG PG+G KTA  LL        D Y +LD +  LA  G    P +   L +
Sbjct: 180 MGDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAK---LEE 236

Query: 254 FADQIRLSRELVRLTCDAPAPEAIDDFAVRDPDPAILSAFLETMEFRSLQRRVGDGKAGP 313
             D   LS EL  +  D P    ++     +PD   L A    MEF+S    +    A  
Sbjct: 237 HRDAAFLSYELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQRDAAKA 296

Query: 314 SDVSAFAPKRAPNLNAPVATPRYGQVVEGPAEVQTFDHAAYECVQTEEALDRWIARATEV 373
            D  A A                   VE   +V+    A YE +  +   D W+ +  + 
Sbjct: 297 GDDVAPA-------------------VEPAVKVE----AKYETILDQARFDAWLEKLRQA 333

Query: 374 GVVGFDTETDTLSATHAGLCGVSLAVGPNEACYIPLTHEHEPQAGEGGLFGEAGETPEPI 433
            +  FDTET  L A  A L G+S AV P+EA Y+PL H++E                 P+
Sbjct: 334 PLFAFDTETTGLDAQQAQLVGLSFAVEPHEAAYVPLAHDYEGA---------------PV 378

Query: 434 HQLDKPTTLAKLKTLLEDPSVLKVLQNAKYDIAVMARRG----IRVAPYDDTMLMSYVLE 489
            QLD+   L  LK LLEDP+  KV QNAKYDI ++A       +R   YD TML SYVL 
Sbjct: 379 -QLDREAVLLALKPLLEDPAKAKVGQNAKYDINILANGSPAIEMRGVAYD-TMLESYVLN 436

Query: 490 GGLHGHGMDELARLHLGHEPIPFKSVAGTGKSQKSFKHVALKPASEYAAEDADVTLRLWR 549
                H MD LA+ +L H  I F+ +AG G  Q +F  + L  A  YAAEDAD+TLRL  
Sbjct: 437 STATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQINLDKAGPYAAEDADITLRLHH 496

Query: 550 ILKPRLARE-GLSTVYETLERSMPTVLADMELNGVRIDPDRLKRLSSEFGLRMAELEAQA 608
            L+ RLA+   +  V   +E  +  VLA +E  G  +D + LK  S E G++MAELE +A
Sbjct: 497 ALQARLAQTPSVQPVLMDIEMPLVPVLARIERQGALVDAELLKVQSGELGVKMAELELRA 556

Query: 609 HEIAGRPFNIGSPRQIGEILFGELNLPGGKKTASGQWGTDASVLEELALS-HDLPRAILD 667
           +E+AG  FN+GSP+Q+G IL+ +L +P   KTA GQ  T  +VL+ELAL  + LP  ++ 
Sbjct: 557 YELAGETFNLGSPKQLGTILYDKLGMPVLSKTAKGQPSTAEAVLDELALQGYPLPEVLMQ 616

Query: 668 WRQLSKLKGTYTDALTAAADPKTDRVHTSYQLAAATTGRLASSDPNLQNIPIRTETGREI 727
           +R LSKLK TYTD L    +P+T R+HTSYQ A A TGRL+SSDPNLQNIPIRT  GR I
Sbjct: 617 YRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSSDPNLQNIPIRTAEGRRI 676

Query: 728 RQAFIAAPGNVLISADYSQIELRLLAHIGDIPELKRAFKAGLDIHAATASEMFGVPVEGM 787
           RQAFIA+PG  L++ADYSQIELR++AH+     L  AF+  LD+H ATA+E+FGV +E +
Sbjct: 677 RQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLDVHRATAAEVFGVALEDV 736

Query: 788 PSETRRRAKAINFGIVYGISAFGLANQLGIDQGEAGAYIKTYFERFPGIRAYMDKTKAEV 847
            ++ RR AKAINFG++YG+SAFGLA Q+G+D+ ++  YI  YF R+PG+ AYM++T+A+ 
Sbjct: 737 TTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFARYPGVLAYMERTRAQA 796

Query: 848 RQTGFVSTVFGRRIHIPAIHSKSGAERQFGERAAINAPIQGAAADIIRRAMIRMPAALTK 907
            + GFV T+FGRR+++P I++K+ A R+  ER AINAP+QG AADII+RAM+++   L++
Sbjct: 797 AEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAADIIKRAMVKVDNWLSE 856

Query: 908 AGLATRMLLQVHDELVFEAPEAEADRAIAVIKRVMENASDPAVALTVPLVVDARAASNWD 967
           +GL  R++LQVHDELV E  E    +    I++ M  A+     L VPL+V+A   +NWD
Sbjct: 857 SGLDARVILQVHDELVLEVREDLVQQVKDEIRQHMSQAAQ----LDVPLLVEAGVGANWD 912

Query: 968 AAH 970
            AH
Sbjct: 913 EAH 915