Pairwise Alignments

Query, 970 a.a., DNA polymerase I from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 998 a.a., DNA polymerase I from Agrobacterium fabrum C58

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 563/1000 (56%), Positives = 685/1000 (68%), Gaps = 62/1000 (6%)

Query: 25  LWMIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNMLWKLLKDMKGAD---GPTHLVA 81
           L+++D S +IFRA+HA+PPL RKSDGLPV AV G+CNMLWKLLKD +  D    PTH   
Sbjct: 7   LFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVTPTHFAV 66

Query: 82  IFDNSEKTFRNTLYDQYKAHRPPPPEDLVPQFPLVREATAAFGVHCVELPGYEADDLIAT 141
           IFD S KTFRN LYD YKA+R  PPEDLVPQF L+REAT AF + C+E  G+EADD+IAT
Sbjct: 67  IFDYSSKTFRNELYDLYKANRSAPPEDLVPQFGLIREATRAFNLPCIETEGFEADDIIAT 126

Query: 142 YACKARDAGGEAVIVSSDKDLMQLIGGGVVMWDPMKDRRLAEPEVFEKFGVGPEKMVDLQ 201
           YA +A   G +  I+SSDKDLMQL+   V M+D MKD+++  P+V EK+GVGPEKM+DLQ
Sbjct: 127 YARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVIEKWGVGPEKMIDLQ 186

Query: 202 ALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLANAGEIKQPKRRQTLIDFADQIRLS 261
           A+ GDS DNVPG PGIGPKTAAQLL+EYGDLDTLLA AGEIKQ KRR+ +I  A+  RLS
Sbjct: 187 AMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANAELARLS 246

Query: 262 RELVRLTCDAPAPEAIDDFAVRDPDPAILSAFLETMEFRSLQRRVGDGKAGPSDVSAFAP 321
           R+LV L  D P  +++++  +   +   L AFL+ MEF +L RRV +  A  SD SA  P
Sbjct: 247 RQLVALRTDVPLEQSLEELVLEPQNGPKLIAFLKAMEFTTLTRRVAE--ATDSDASAIDP 304

Query: 322 KRAP----------NLNAPVAT------------------PRYGQVVEG--PAEVQT--- 348
              P          +L+AP A                   P    + EG  PA++ T   
Sbjct: 305 ANVPVQWGADAHGPDLDAPAAAMAGDVSAEGNNRPASAVAPAKRMIGEGSTPADLTTARQ 364

Query: 349 -------FDHAAYECVQTEEALDRWIARATEVGVVGFDTETDTLSATHAGLCGVSLAVGP 401
                   D  AY  ++    LD WIA A E GVV FDTET +L    A L G SLA+  
Sbjct: 365 ALFAATKIDTTAYTAIRDIATLDLWIAAAREAGVVAFDTETTSLDPMQAELVGFSLAIAD 424

Query: 402 N---------EACYIPLTHEHEPQAGEGG-LFGEAGETPEPIHQLDKPTTLAKLKTLLED 451
           N          A Y+PLTH+     G GG LF +  +  E   Q      L +LK LLED
Sbjct: 425 NGKDASGTDIRAAYVPLTHK----TGSGGDLFSDGIKLAEG--QAPFAEALERLKDLLED 478

Query: 452 PSVLKVLQNAKYDIAVMARRGIRVAPYDDTMLMSYVLEGGLHGHGMDELARLHLGHEPIP 511
            +VLKV QN KYD  +M R G+ +  +DDTML+SYVLE G   HGMD L+   LGH PI 
Sbjct: 479 EAVLKVAQNLKYDYLLMKRHGVVMRSFDDTMLISYVLEAGKTTHGMDTLSERWLGHTPIA 538

Query: 512 FKSVAGTGKSQKSFKHVALKPASEYAAEDADVTLRLWRILKPRLAREGLSTVYETLERSM 571
           +K V G+GKS  +F  V +  A+ YAAEDADVTLRLW  LKPRL  E L+ VYE LER +
Sbjct: 539 YKDVTGSGKSSITFDFVNIDKATAYAAEDADVTLRLWMALKPRLVSERLTKVYERLERPL 598

Query: 572 PTVLADMELNGVRIDPDRLKRLSSEFGLRMAELEAQAHEIAGRPFNIGSPRQIGEILFGE 631
             VLA ME  G+ +D   L RLS E   + A  E + +E+AG  FNIGSP+Q+G+ILFG 
Sbjct: 599 VPVLAHMEERGITVDRQILSRLSGELAQKAASFEEEIYELAGERFNIGSPKQLGDILFGR 658

Query: 632 LNLPGGKKTASGQWGTDASVLEELALSH-DLPRAILDWRQLSKLKGTYTDALTAAADPKT 690
           + LPGG KT +GQW T A VLE+LA    +LPR I+DWRQL+KLK TYTDAL +   P+T
Sbjct: 659 MGLPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPSYIHPET 718

Query: 691 DRVHTSYQLAAATTGRLASSDPNLQNIPIRTETGREIRQAFIAAPGNVLISADYSQIELR 750
            RVHTSY LA+ TTGRL+SS+PNLQNIP+RT  GR+IR AFI+ PG+ L+SADYSQIELR
Sbjct: 719 KRVHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELR 778

Query: 751 LLAHIGDIPELKRAFKAGLDIHAATASEMFGVPVEGMPSETRRRAKAINFGIVYGISAFG 810
           +LAH+ DIP+L+ AF+ G+DIHA TASEMFGVPVEGMPSE RRRAKAINFGI+YGISAFG
Sbjct: 779 VLAHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFG 838

Query: 811 LANQLGIDQGEAGAYIKTYFERFPGIRAYMDKTKAEVRQTGFVSTVFGRRIHIPAIHSKS 870
           LANQL I + EAG YIK YFERFPGIR YM+ TKA  R+ G+V T+FGRR H P I S +
Sbjct: 839 LANQLSIARSEAGDYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSN 898

Query: 871 GAERQFGERAAINAPIQGAAADIIRRAMIRMPAALTKAGLATRMLLQVHDELVFEAPEAE 930
            + + F ERAAINAPIQG+AADIIRRAMIR+  AL    L+ RMLLQVHDEL+FE  EAE
Sbjct: 899 PSVKAFNERAAINAPIQGSAADIIRRAMIRIEPALEAEKLSARMLLQVHDELIFEVEEAE 958

Query: 931 ADRAIAVIKRVMENASDPAVALTVPLVVDARAASNWDAAH 970
            ++ + V+  VME+A+ PA+++ VPL VDARAA NWD AH
Sbjct: 959 IEKTLPVVVSVMEDAAMPAISMRVPLKVDARAADNWDEAH 998