Pairwise Alignments

Query, 290 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 315 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) from Variovorax sp. SCN45

 Score =  166 bits (420), Expect = 6e-46
 Identities = 117/282 (41%), Positives = 149/282 (52%), Gaps = 16/282 (5%)

Query: 21  LYLVATPIGNLRDMTLRALDVLAAADLVLAEDTRVTAKLLSAYGLK---ARLERCDDHAS 77
           LY+VATPIGNL D+TLRAL VL   D +  EDTR T  LL AYG+    ARL     H  
Sbjct: 30  LYVVATPIGNLADITLRALHVLQLVDAIACEDTRHTQSLLRAYGIDRPGARLLAVHQHNE 89

Query: 78  GRAAEQAIERLREGQVVALVSDAGTPLVSDPGFVVARAVIAEGLPVHPIPGASSLLAALC 137
             AA+  + RL +G+ +A VSDAGTP VSDPG  +A AV A G  V P+PGASS+   + 
Sbjct: 90  AEAAQTVVARLAQGERIAYVSDAGTPGVSDPGARLAAAVRAAGQRVLPLPGASSVTTLVG 149

Query: 138 IAGLPAD--------RVLFAGFLPPKTAGRTAALEALKSQRQTLVFFESGPRLKDSLTDM 189
            AGL AD          +FAGFLP K   R  A++AL  + + +V  E+  R+ +SL   
Sbjct: 150 AAGLVADGGDGNASSAFVFAGFLPSKAGERDTAVQALSQEPRAVVLLEAPHRI-ESLARA 208

Query: 190 TAVLGPRPAAVARELTKLYEE---CVRGTLDDLAVDPRLDSPKGEIVVVVGPGEEVQATE 246
            A LG R   V RELTK +EE        L D     R D  +GE  +V+ P        
Sbjct: 209 LATLGERRITVGRELTKQFEEIATVAASALPDWFGADR-DRTRGEFALVLHPVAVSGDGG 267

Query: 247 ADADAALIDALQTLSTGDAASEVAKALGLNRKTLYRRALELK 288
           A+ +  L   L+ L    A    A+  G  R TLY  AL ++
Sbjct: 268 AEGERVLRLLLEELPVKTAVKLAAEISGSPRNTLYELALRIR 309