Pairwise Alignments

Query, 386 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 390 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  457 bits (1175), Expect = e-133
 Identities = 224/368 (60%), Positives = 289/368 (78%), Gaps = 16/368 (4%)

Query: 21  NLSGLTRAGLRQALIDANVCPPEKAKMRASQVWSWIHHYGVTEFSAMSNVAKDMQAKLAE 80
           +L GLTR  + +AL +  V P ++ KMR SQ+W+W++  GV++F  M+NVAK+++ KL  
Sbjct: 6   SLIGLTREEMGEALAEIGV-PQKQVKMRVSQLWNWLYVRGVSDFDNMTNVAKELREKLKA 64

Query: 81  HFTLARPEVVERQVSKDGTRKWLIRTAPG-----IEIETVYIPDVGRAGALCVSSQVGCT 135
            FT+ARPE+VE Q+S DGTRKWL+R  P      +EIETVYIP+ GR G LC+SSQVGC+
Sbjct: 65  AFTIARPEIVEEQISNDGTRKWLMRFPPRGAGRPVEIETVYIPEEGR-GTLCISSQVGCS 123

Query: 136 LNCTFCHTGTQKLVRNLTAAEIVAQVQVARDDLEEWPS---------PKEDRRLSNIVFM 186
           L C+FCHTGTQ+LVRNLTA EI++Q+ +ARD L ++P          P E R++SNIV M
Sbjct: 124 LTCSFCHTGTQRLVRNLTAEEILSQLLLARDRLGDFPDGSTPVGAYVPSEGRKVSNIVMM 183

Query: 187 GMGEPLYNLDHVADAIDIISDNEGIALSRRRITVSTSGVVPQLQALGDRTAAMLAISLHA 246
           GMGEPLYN +HV  A+ I +D +G++LS+RR+T+STSGVVP++   GD    MLAISLHA
Sbjct: 184 GMGEPLYNFEHVKTALLIATDGDGLSLSKRRVTLSTSGVVPEIFRTGDEIGVMLAISLHA 243

Query: 247 TNDALRDVLVPLNKKYPLDQLMAAIRAYPGLSNARRVTFEYVMLKGVNDSPEEARALLKL 306
             D LRD+LVP+NKKYPL +L+ A R YPG+SNARR+TFEYVMLK VNDS E+A+ L++L
Sbjct: 244 VRDDLRDMLVPINKKYPLKELIEACRNYPGVSNARRITFEYVMLKDVNDSLEDAKMLVQL 303

Query: 307 IEGIPAKINLIPFNPWPGVEYECSDWKTIERFAAILNKAGYASPIRTPRGRDILAACGQL 366
           ++G+PAKINLIPFNPWPG  Y+CS+W  IE+FA  +N+AGYASPIRTPRGRDILAACGQL
Sbjct: 304 LKGVPAKINLIPFNPWPGTNYQCSEWAQIEKFADFINQAGYASPIRTPRGRDILAACGQL 363

Query: 367 KSESEKVR 374
           KSESE++R
Sbjct: 364 KSESERMR 371