Pairwise Alignments

Query, 484 a.a., UdgX family uracil-DNA binding protein from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 285 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  128 bits (321), Expect = 3e-34
 Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 19/260 (7%)

Query: 1   MAVVMLDGETDFDGWRKAARAFRLAGVEPAAARFVVAGTMEQGGLFD--QPIAEEASPTP 58
           M V+ LD +  F  WR+ AR     G++P+        T  QG + D    +A  A+P P
Sbjct: 1   MGVIALDCDDLFATWREQARGLLSHGIDPSEV------TWSQGPMADLLAVLAVPAAP-P 53

Query: 59  DERRAFN--VPKEFVDLAQNLILHRSADRFDLMYRLLWRLKDEPDLIKVISDRDVADSLE 116
           D    F   VP   +   +    +R   R++L+Y +LWR+        +  DR  ++   
Sbjct: 54  DGPGPFRAKVPAALLSQLEQASRYRGEQRWNLLYEVLWRVAHGDRTAMLAGDRLGSELQR 113

Query: 117 RVKNVSRASHKMKAFVRFRQVHDDLGEAW----VAWFEPPHRVLEKTAPFFQRRFTTMRW 172
           R+K V+R +H + AFVRF  + ++L E      VA+ EP H +L   +  F  R   +RW
Sbjct: 114 RIKQVTREAHHLHAFVRFVPLPEELAEHLQLDLVAYHEPAHDILHSASAHFADRLGRLRW 173

Query: 173 SILTPDGSAFWDGEALRFG---PPATRDMAP-AEDEIEDFWKTYYASTFNPARLKVKTMQ 228
            I TP     +DG++  +    P   R  A  AED   + W+TYY  TFNPARL    ++
Sbjct: 174 LIATPQDGIRFDGQSFDYQRQCPEPWRQWARNAEDPGAELWRTYYRHTFNPARLNPDALR 233

Query: 229 GEMAKSYWKNLPEAALIPEL 248
             M   +W++LPE  LIP+L
Sbjct: 234 LHMPGRFWRHLPEGMLIPQL 253